Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4951 ATGGGCGGTTGTTGCTGTTGTGCTTCCAAGGAGACTGTATTAAGCGCTCCACCTGCTTACTATTATCAGTATCCAAGAGCATCAGAGGAGCATGTTCCACTATCTTCTCAACCGGGTGCTCCCTCTGGTGGAAGGCTCTTGGTTGATACTAATCTAGATACTTCGAGTCCTGATACTTATAGACCACCTCCTGCTCCTCTCCCTTTTGACTTGACAGTAGGTGCCACTCAGACTGCACCTGTGACTCAAGAAATTTGCTGTGACAAGAACAATACATCCTCGCTTTCTACAAATTCTAATTCAGTTCAAGAACCATCTAGAGACAATCACGGAACCTCACCTAAGTCTGAAGAACTGAAGGAATCAGAATGCAAAGGTCAGACTGATTCAGAACAGGACTCAGCAAAGGATTCTGAAATTGAACTTTCAAAGTTGGGCGAACCTATAAATTTAGTAGAAGAAGAGGACACATGCCCGATATGTTTAGAAGAATATGATGCTGAAAATCCAAAACTCACCACTCAATGCGGACATGATTTTCACCTTGCTTGCATTCTGGAATGGATGGAAAGAAGTGAAACTTGCCCCGTTTGTGATCAGGCTACAGTTTTCAGCACTCCCATTGAATAG 630 0.4349 MGGCCCCASKETVLSAPPAYYYQYPRASEEHVPLSSQPGAPSGGRLLVDTNLDTSSPDTYRPPPAPLPFDLTVGATQTAPVTQEICCDKNNTSSLSTNSNSVQEPSRDNHGTSPKSEELKESECKGQTDSEQDSAKDSEIELSKLGEPINLVEEEDTCPICLEEYDAENPKLTTQCGHDFHLACILEWMERSETCPVCDQATVFSTPIE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4951 209 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 209 - -
Mal7g4951 209 SMART ring_2 158 198 IPR001841 -
Mal7g4951 209 Pfam Ring finger domain 156 198 IPR001841 -
Mal7g4951 209 SUPERFAMILY RING/U-box 152 205 - -
Mal7g4951 209 MobiDBLite consensus disorder prediction 110 142 - -
Mal7g4951 209 MobiDBLite consensus disorder prediction 31 72 - -
Mal7g4951 209 MobiDBLite consensus disorder prediction 93 142 - -
Mal7g4951 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 204 IPR013083 -
Mal7g4951 209 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 209 - -
Mal7g4951 209 MobiDBLite consensus disorder prediction 93 109 - -
Mal7g4951 209 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4951 Mal-Chr7 118293880 118300910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4951 1 209 C3H Transcription Factor Family AT5G41350 50.463 5.17e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4951 - - gmx:100790079 321.242