Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4950 ATGGCAAATGGGTCTTTCCTTGATCGCATTGAAGCTGAATTTCACGGAAACGGCGGCTGTCTTGTCGAGTATCGGGCTGATCGGGACAAAGCTAAACAAAAAGCTTTGTTTTGTCAAGTTTTTTCGGTTTACCTAAAGGAGAATTGTATTAGAGGCATCGTGAGGCCTGTGCCGGTGATGCTCGGTGATGGTCCGTTGCTTGATTTATATCAACTGTTTTTCCTTGTGAAGGAAAAAGGTGGGTATGATGCGGTATCGAGAAGAGGGTTGTGGGATTCTGTGATAATTGAACTGGGTTTTAACCTTCATGTTTTGGCTTCGGTGAAATTAGTTTATGATAAATATCTGAGGGATTTTGAAGGTTGGCTCAGCAAAACATTCGAAGAGAAGAGTTTCAAAAATGGGAATCATGGGTATCTGAATTCATTGCCAATAGATCTAGAAAAAGAGTTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAAAGATGAGGATTTTGTTCCGTTAGAATCGAGTAACATCATAAAGTACATTGATTTTGTTAACCACAAGAGTGATGGTTATTTATTGGACACTCACACTAAAAACCAACATAACAAATGCGAGGGTGTCCAAAATGTTAACGGTGATGGTATTGATGATGATGAAAAATTCGGCAATGATGTTAAGGATTATTTAGCTACCTCTTGTGTGGAAATTTATGAGAAGGAATTTAATTCTCGCAAACGTAAACGGGAATCGTTATCAGGAATGGTAAACTGGACGAGGCATATCGCAAAACATCCATTTGATCCTGTATCTCCACCATTACCAGAACCATCAAAGTTGAAGGAGTACAAAGGAGGCCAGGAATTTTTTGTTCAGTTGCTGAGGGCAAGAGACGTTCTGTCGGTGAGAAAGTATGCTGAACCAAACGGTGGATCATCTTCCCAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATCATGTTGCTCTTGGTCACCAAGGTACAGTGAAATTAAGATGTAGTGAAAGGCTTCCTGTTGCTGTTAAACCTCGCTGCCTTTGCTGCAATTCATGTTCTGGTAATGGAAATAAATTGCACGGTTCAGTCAATATGGAGTCAGAAAAATGTCCACTGGAGAAAGCAACTGTCAAACCAGATGCAACTGAAAAGAAAAAATCAACTACCAAATCAGATGCGATTGAAAAGAAAAAATCAGCTGCCAACCAAGATGTTACTGAAAAGGAAAAATCTGAGCCATCTACGGATGATTTTCGTGAAAAGTTTGTTTCTGTAGGCCACATTTTCCAAGCGGAAGTTCCGGAATGGACTGGTGTGGTTTCTGAGAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTGTTAAAGATGGTTCAAAACCTACTACCGAAGCAGATCTTGTTGGGAGAGGAAGACGGGGAAAGTGTAGCTGCAACGTTCAAGGTTCTGTTGACTGTGTCAGATTTCATACTGCTGATAACAGGATGAAACTGAAGCTTGAATTGCGCTCTGCGTTTTATCATTGGGGATTTGATAAAATGGGCGAGGAAGTTTCACTTCAATGGACAGCCGATGAAGAAAAGAGATTTAAGGATGCAATGAGGCTAAAATTCCCCTCCCAAAACAAGTCCTTTTGGAATAATCCCTCCAGATACTTTCGAAATAAGACGAGAAAAGACATGGTGAGCTATTACTTCAATGTATATCTTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCAAAGACTGTTGACAGCGATGATGATGAAGTCGAATTTGGATCTTTTAGTGATGGCTTCGGGAGGAATGCTATCAAGCATCCATCTATGGAATTCATGGAGTGTTCAGAGAACAAGGAATGCTTTGATTTTGAGTAG 1887 0.4054 MANGSFLDRIEAEFHGNGGCLVEYRADRDKAKQKALFCQVFSVYLKENCIRGIVRPVPVMLGDGPLLDLYQLFFLVKEKGGYDAVSRRGLWDSVIIELGFNLHVLASVKLVYDKYLRDFEGWLSKTFEEKSFKNGNHGYLNSLPIDLEKEFRSLLCSNLKDKDEDFVPLESSNIIKYIDFVNHKSDGYLLDTHTKNQHNKCEGVQNVNGDGIDDDEKFGNDVKDYLATSCVEIYEKEFNSRKRKRESLSGMVNWTRHIAKHPFDPVSPPLPEPSKLKEYKGGQEFFVQLLRARDVLSVRKYAEPNGGSSSQKVKMHPAMYEDHVALGHQGTVKLRCSERLPVAVKPRCLCCNSCSGNGNKLHGSVNMESEKCPLEKATVKPDATEKKKSTTKSDAIEKKKSAANQDVTEKEKSEPSTDDFREKFVSVGHIFQAEVPEWTGVVSESDSKWLGTQVWPVKDGSKPTTEADLVGRGRRGKCSCNVQGSVDCVRFHTADNRMKLKLELRSAFYHWGFDKMGEEVSLQWTADEEKRFKDAMRLKFPSQNKSFWNNPSRYFRNKTRKDMVSYYFNVYLIQLRSYQNRVTPKTVDSDDDEVEFGSFSDGFGRNAIKHPSMEFMECSENKECFDFE* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4950 628 SUPERFAMILY ARID-like 28 124 IPR036431 GO:0003677
Mal7g4950 628 SMART ARID_2 28 120 - -
Mal7g4950 628 ProSiteProfiles ARID domain profile. 31 124 IPR001606 GO:0003677
Mal7g4950 628 MobiDBLite consensus disorder prediction 376 419 - -
Mal7g4950 628 SMART bright_3 32 125 IPR001606 GO:0003677
Mal7g4950 628 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 27 628 - -
Mal7g4950 628 CDD ARID 33 120 - -
Mal7g4950 628 Gene3D - 22 134 IPR036431 GO:0003677
Mal7g4950 628 Pfam ARID/BRIGHT DNA binding domain 45 120 IPR001606 GO:0003677
Mal7g4950 628 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 27 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4950 Mal-Chr7 118275611 118280255 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mal7g4950 ARID 3.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4950 - - mtr:MTR_1g073530 820.076