Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4900 ATGAACATGGAGGCAGCCCAAAGTAATGTTGACAAGCCAATTTGGCTTGATGCTTTTCTTGGAGAAAAGTACTATGGCTCATGTTCTACTCATCAAATTCGTAGGAATGAGTTAAGAAAGTATTGCATAAATTGCAATATGTTATGTTGCCAACATTGTATATCATCTGGTGTTCATCGCCGTCACAAAATACTGAAAATATATAGACATGTTCGCAAGGATGTTGTCTCCCTGAGGGCTATGGAAAAGTATTTTGATTGCTCTGGAGTTCAGACTTACAAAAGCAACAAGCGAGTGGTTGTTTCTCTGAATCCTGCCCAATCCAGTGAGTTGGCATTGAATGTTGAAGAATCATGCAAAGTTTGCAACAAAAAAGTGATTGAACCTGGTTTATATCGCTACTGCGCTGTTTCTTGCAAGGTTGAAGCAGTTTCAAAAAAGTTTGAATCTGATGAACCAGTTAACACAACACCACTTGAGTTTTCTTCATTACCTTGTCTCCAGAGTCCTTCTCAGCCCCAGGAAACACAGGAGGGAACTTCTAAGCCTTCTAAGAGAAAAAGGAAAAGAAAGGGAACACCTCATAGATCTCCCTGCCGGATTATTTAA 609 0.3974 MNMEAAQSNVDKPIWLDAFLGEKYYGSCSTHQIRRNELRKYCINCNMLCCQHCISSGVHRRHKILKIYRHVRKDVVSLRAMEKYFDCSGVQTYKSNKRVVVSLNPAQSSELALNVEESCKVCNKKVIEPGLYRYCAVSCKVEAVSKKFESDEPVNTTPLEFSSLPCLQSPSQPQETQEGTSKPSKRKRKRKGTPHRSPCRII* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4900 202 Gene3D Classic Zinc Finger 22 85 - -
Mal7g4900 202 Pfam B-box zinc finger 25 67 IPR000315 GO:0008270
Mal7g4900 202 MobiDBLite consensus disorder prediction 160 202 - -
Mal7g4900 202 Pfam PLATZ transcription factor 69 141 IPR006734 -
Mal7g4900 202 ProSiteProfiles Zinc finger B-box type profile. 28 67 IPR000315 GO:0008270
Mal7g4900 202 MobiDBLite consensus disorder prediction 160 179 - -
Mal7g4900 202 SUPERFAMILY B-box zinc-binding domain 27 73 - -
Mal7g4900 202 MobiDBLite consensus disorder prediction 183 202 - -
Mal7g4900 202 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 5 198 - -
Mal7g4900 202 CDD Bbox2 28 67 - -
Mal7g4900 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4900 Mal-Chr7 117667637 117670924 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mal7g4900 PLATZ 1.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4900 - - mtr:MTR_8g097310 226.868