Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4896 ATGTGGGGATGGATGATCAGGGAAGGCCGTACGGCATCGTCAGCAGCATCATGGAACGCGGCAGCTTGGAACCTAACCCTCCTCCGTAACATGGGTGGCGGACCTCGAACGTTCCCCGGCGGCGTAAGCAAATGGAAATGGAAACGTATGCACGAAAAACGCGCCAAAGAGAAACAGCGAAACCTTCTCGAACAAGAGAAACAACTCTACCAAGCTCGAATTCGATCTCACATTCGCTCTTCTCTCTCACCACCTTCTTCTTCTTCTTCTTCTTCCACCACTCATAACCCTATTTCCCCCAATCAACACATCAAAGCCCTCGCCGATCGTTTCATGAAAGACGGTGCTCTAGATCTATGGAACGACCTCGACGGGCCAGAAATCCCCAATGCCCAGGCCCAGATTCAAGCCCAACCATCGCCGCAATTACAACCTAGCAATCAGAATTTTAGTAATTTGAATAATTATTCACAAATTAGAGGTTACCGTTCTGTTCCTGAGGTTAGGGATTCGACTCGTTCTGTTCCTAGGGTTAGGGATTTGGCTGATAGGAAGCGGGTTGGGACTGAAAAGCCCGAAAGGCGAAAAATTTGGAGAAAGAATGATTCTTCTAGTGATGATAGTGAGAGTGAGAATGAAGTGGAAACTAAAAATCAGGGGTATTATTCTAAGGTGGGTAGTATTGCTGCTTTGGGGAAATATGATGTCAAGAGGGAGAGGAGAGTGATGCCCAAGGATTTTGAGGATGGAACTGATTTTTCGGAGCAGGTTGAGTTGATTAAGCGTGAGCTTGAGAAGAAGAAATTGAGTCGGGATGAGGAGAATCAGAGTGAGGAACAGGAAAATGTTCTTAGTCAGACAAGATTTGAGGATTGCGCCATCTCACCATTGACAATCAAAGCACTTTCTACATCTGGTTACACTCATATGACCCGGGTTCAAGAGACTAGCCTCCCTATTTGTCTTGAGGGCGTTGATGTTATGGTCAAGGCTAAAACTGGCACTGGAAAAACAGCAGCTTTTTTGCTTCCTGCTATTGAAACAGTTTTGAAAGCTATGAGCAGCAATACCTCTCATCGTGCACCACCAATATTTGTTCTTATTCTATGCCCTACCAGAGAACTTGCTAGTCAAATTGCTGCTGAAGCAAAGGTTTTGCTTAAATATCATGATGGCGTAGGGGTGCAGACTCTAGTTGGAGGTGTACGATTTAAAGTTGACCAGAAACGCCTTGAATCAGATCCATGCCAGATGCTTGTTGCTACACCTGGTAGGTTGCTGGATCATATTGAGAATAAGACCGGAATATCTGTACGACTGATGGGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTTGGGTTTCGAAAGGATATAGAAAAAATTGTTGATTGTTTGCCCCGTCAAAGACAATCCTTACTGTTTTCTGCAACTATCCCAAAGGAGGTCCGTCGAATATCTCAGCTTGTTTTGAAAAGGGAGCACAAATATGTTGATACGGTTGGAATGGGCTGTGTGGAAACTCCTGTTCAGGTAAAGCAATCCTATCTTATCGCACCACATGAATCACACTTTCAGATAGTACATCATATTTTGAAAGAGCATATCTCGCAAACACCTGATTATAAGGTTATTGTTTTCTGTATAACTGGGATGGTGACATCACTCACATATCACCTTCTTCGGGATATGAAACTGAATGTTCGGGAGATACATTCTCGAAAACCTCAGCTGTATCGAACTCGTGTATCAGATGAGTTTAAGGAATCCAAACAAATGATTCTTGTCTCCTCTGATGTTTCATCACGTGGAATGAATTATCCTGATGTTACTTTAGTCATACAGGTGGGAATTCCTTCAGACCGTGAACAATATATACATCGTCTTGGAAGAACGGGACGGGAAGGCAAAGAAGGGAAAGGCATATTGTTGATCGCACCATGGGAAGAGTATTTTTTAAATGAGATCAAGGATCTCCCTCTAGAGAAATTCCCCTTACCTGATTTAGATCCACAGGCACAGCTTAAGATTGAGCAATCAATGGCAAAGATTGATAATGATGTCAAAGAAGCAGCTTATCATGCTTGGCTTGGTTATTATAACTCTATCAGGGAAATTGGGAGGGAGAAGACGACAGTAGCTGAGCTGGCAAGCCGGTTTTCTGAATCAATTGGTTTACCGAGGGCTCCTTCTCTCTTCCGAAAAACTGCGCTAAAAATGGGTTTGAAAGACATTCCTGGCATTAGAATTCGTAGATAG 2271 0.4359 MWGWMIREGRTASSAASWNAAAWNLTLLRNMGGGPRTFPGGVSKWKWKRMHEKRAKEKQRNLLEQEKQLYQARIRSHIRSSLSPPSSSSSSSTTHNPISPNQHIKALADRFMKDGALDLWNDLDGPEIPNAQAQIQAQPSPQLQPSNQNFSNLNNYSQIRGYRSVPEVRDSTRSVPRVRDLADRKRVGTEKPERRKIWRKNDSSSDDSESENEVETKNQGYYSKVGSIAALGKYDVKRERRVMPKDFEDGTDFSEQVELIKRELEKKKLSRDEENQSEEQENVLSQTRFEDCAISPLTIKALSTSGYTHMTRVQETSLPICLEGVDVMVKAKTGTGKTAAFLLPAIETVLKAMSSNTSHRAPPIFVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQKRLESDPCQMLVATPGRLLDHIENKTGISVRLMGLQMLVLDEADHLLDLGFRKDIEKIVDCLPRQRQSLLFSATIPKEVRRISQLVLKREHKYVDTVGMGCVETPVQVKQSYLIAPHESHFQIVHHILKEHISQTPDYKVIVFCITGMVTSLTYHLLRDMKLNVREIHSRKPQLYRTRVSDEFKESKQMILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIAPWEEYFLNEIKDLPLEKFPLPDLDPQAQLKIEQSMAKIDNDVKEAAYHAWLGYYNSIREIGREKTTVAELASRFSESIGLPRAPSLFRKTALKMGLKDIPGIRIRR* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4896 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 658 IPR027417 -
Mal7g4896 756 Coils Coil 48 75 - -
Mal7g4896 756 Pfam DEAD/DEAH box helicase 311 489 IPR011545 GO:0003676|GO:0005524
Mal7g4896 756 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 260 755 - -
Mal7g4896 756 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 34 127 - -
Mal7g4896 756 MobiDBLite consensus disorder prediction 79 100 - -
Mal7g4896 756 SMART ultradead3 306 517 IPR014001 -
Mal7g4896 756 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 287 315 IPR014014 GO:0003724
Mal7g4896 756 MobiDBLite consensus disorder prediction 161 218 - -
Mal7g4896 756 MobiDBLite consensus disorder prediction 135 154 - -
Mal7g4896 756 MobiDBLite consensus disorder prediction 166 214 - -
Mal7g4896 756 Gene3D - 252 502 IPR027417 -
Mal7g4896 756 PANTHER RNA HELICASE 34 127 - -
Mal7g4896 756 Pfam Helicase conserved C-terminal domain 534 639 IPR001650 -
Mal7g4896 756 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 318 501 IPR014001 -
Mal7g4896 756 Coils Coil 261 281 - -
Mal7g4896 756 PANTHER RNA HELICASE 260 755 - -
Mal7g4896 756 SMART helicmild6 559 640 IPR001650 -
Mal7g4896 756 Gene3D - 511 735 IPR027417 -
Mal7g4896 756 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 535 676 IPR001650 -
Mal7g4896 756 CDD SF2_C_DEAD 516 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4896 Mal-Chr7 117626569 117630738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4896 287 665 Eukaryotic Initiation Factors Gene Family AT3G19760 26.835 6.01e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4896 - - gmx:100808520 1048.11