Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4862 ATGGATAAGCTGAATTTTATTAAGAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAACCAACAGATGAAGAGCTTGTGTTTAATTATTTGAAATGTAAAATCTTCTCATTCCCTTTGCCTGCTTCCATCATTCCTGAGGTCAATGTTTGCAAGTATGATCCTTGGGATTTGCCAGGAGGTTGTGATGAACAAGAGAGACACTTTTTTAGCTCCAAGGAAACAAAGTATAGAAATAGTAATCGGATGAGTAGAACAACAAAATGTGGATATTGGAAGGCAACAGGGTCAGACAAAAGAATTTCATCTTCAAGTTGTAATGGCATTGTTGGGCTAAGAAAAACGTTGGTTTTTTACGAAGGAAAATCCCCAAATGGGTCTAGAACTGATTGGATCTTGCATGAGTATCGCCTCATCAACCTAGAAACTAGTCTTAATAACTCAACTCAGAACTATGGAAATGAGATAGGAGAATGGGTTTTGTGTCGGTTATCTGTGAGGAAAAGAAGTGGTTTAGAATATGGAAGCACTAGTACTCATAATGCTCCTAATTCAAGATTAATGTTTGATTTTATGATGGTAAACAACAAGACATGTTCTTCTACTTCCTCTTCATGCTCAAGTTCCAGTAACAACATTGAGGTCTCTTCAAATGTACAAGATCATGAACAAGACTATGCTGATCATTTTTAA 696 0.3678 MDKLNFIKNGVSRLPPGFRFQPTDEELVFNYLKCKIFSFPLPASIIPEVNVCKYDPWDLPGGCDEQERHFFSSKETKYRNSNRMSRTTKCGYWKATGSDKRISSSSCNGIVGLRKTLVFYEGKSPNGSRTDWILHEYRLINLETSLNNSTQNYGNEIGEWVLCRLSVRKRSGLEYGSTSTHNAPNSRLMFDFMMVNNKTCSSTSSSCSSSSNNIEVSSNVQDHEQDYADHF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4862 231 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 231 - -
Mal7g4862 231 Gene3D NAC domain 23 172 IPR036093 GO:0003677|GO:0006355
Mal7g4862 231 ProSiteProfiles NAC domain profile. 14 168 IPR003441 GO:0003677|GO:0006355
Mal7g4862 231 MobiDBLite consensus disorder prediction 203 231 - -
Mal7g4862 231 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Mal7g4862 231 MobiDBLite consensus disorder prediction 203 221 - -
Mal7g4862 231 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mal7g4862 231 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4862 Mal-Chr7 117148443 117149692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4862 1 172 NAC Transcription Factor Family AT5G13180 62.209 4.83e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal7g4862 NAM 1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4862 - - gmx:100812015 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4862 7 117148443 117149692 Mal2g1357 2 16288097 16289106 ECH
Mal7g4862 7 117148443 117149692 Mal7g4862 7 117148443 117149692 ECH