Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4860 ATGGGTTGCGCGCTCGGGAAATCTGCCGGTGCCGGAGCTCGGCGCCGTCGCCGAGATAATACTGCAACTGCTGACGGAGGTAATAATGCCGTTGAAGTTCGGGAGAAGCAGGAGGCTGAGACTCCTAACGCCGGTGAAGTTCCCGGCAATATTCCGGCACCGGAGAGCCGGCTACCTCGAATTAATTCATTGGCAGCAACCCAACAGAGTTGGCCGCCGTGGTTGATAGAAGTCGCCGGAGATGCAATCAGAGATTGGACTCCTCGCCGCGCCAACACGTTCGAGAAGCTTGCTAAGATTGGGAAAGGGACTTATAGCAATGTGTACAAAGCAAAAGATCTTGTTACGGGAAAGATCGTGGCATTGAAGAAAGTTAGAATTGATAATTTGGAGGCTGAGAGTGTGAAGTTTATGGCAAGAGAGATTCTTGTTTTGAGGAAGCTTGATCACCCCAATGTTATAAAGCTTGAGGGTTTGGTTACTTCAAGAATATCGTCGAGTCTTTACTTGGTATTTGAGTACATGGAACATGATCTTGCTGGTCTTATAGCTGGCATTGGTGTCAAATTCTCTGTGCCTCAGGTCAAATGTTATATGAAACAATTATTGTCGGGCCTTGAGCATTGCCATAGCCGAGGTGTATTGCACCGCGATATAAAGGGCTCCAATCTGCTTATTGATGACGAAGGAATACTTAAAATTGCAGATTTTGGACTCGCGACTTTCTATGATTCTAAGCAAAAGCATCCGATGACTAGTAGAGTTGTGACCCTTTGGTATCGTCCCCCCGAGCTTCTCCTTGGAGCTACATTCTATGGTGTTGGAATTGATCTTTGGAGTGCTGGCTGCATTTTGGCAGAGCTTCTTGCCGGAAGGCCAATCTTGCCTGGAAGAACAGAGGTTGAGCAACTGCACAAAATATTTAAGTTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCTACACTCTTTAAGCCACAACAACCATATAAAAGGCGCATCTCAGAAACATTCGCTGATTTTCCATCTTCTTCATTACCTTTAATTGGAACTCTTCTTGCAATAGATCCTGATGATCGCGGCACCTCCTCGTCTGCTCTGATTAGTGAATTCTTTACCACTGAACCCTATGCTTGTGAACCGTCGAGTTTACCAAAGTATCCTCCTTCCAAAGAATTGGATATAAAGCTGAGAGATGAAGAAGCAAGAAGGCAAAGAGCTCTAAGTGGAAAATCGAATGCAGTTGATGGTGCCAGACAAAGTAGAGTACGTGAGCGCGGTTATGCCATTCCAGCCCCAGAAGCCAATGCAGAGATCCAAACAAACGTAGATAGGCTGAGAGTTGTGACACATGGAAATGCAAAAAGTACAAGTGAGAAATTTCCACCTCCTCATGAAGATGGAGCTGTTGGATATCCAGGGGATGGATCAAATAAAGGAGCTGTTTCATTTGGAACAACTGAAAAAACTTCATTTAGCTCAATATTATCTGATTCAATACATTCTAAATCTGTTGGAAGCTATGCAGGAAGCTCTTCTAAAAGGAGGAAAAGTAATGAAGCATATTCCAGGATATCATCATGGAAATTTATGCGTTCTTCTTTCAAGCCCTCAACAGTTGGTCTTTCATTTAATTTATTATTTAGAAGCAGAAGAAGATGA 1680 0.4381 MGCALGKSAGAGARRRRRDNTATADGGNNAVEVREKQEAETPNAGEVPGNIPAPESRLPRINSLAATQQSWPPWLIEVAGDAIRDWTPRRANTFEKLAKIGKGTYSNVYKAKDLVTGKIVALKKVRIDNLEAESVKFMAREILVLRKLDHPNVIKLEGLVTSRISSSLYLVFEYMEHDLAGLIAGIGVKFSVPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDDEGILKIADFGLATFYDSKQKHPMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGRPILPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRRISETFADFPSSSLPLIGTLLAIDPDDRGTSSSALISEFFTTEPYACEPSSLPKYPPSKELDIKLRDEEARRQRALSGKSNAVDGARQSRVRERGYAIPAPEANAEIQTNVDRLRVVTHGNAKSTSEKFPPPHEDGAVGYPGDGSNKGAVSFGTTEKTSFSSILSDSIHSKSVGSYAGSSSKRRKSNEAYSRISSWKFMRSSFKPSTVGLSFNLLFRSRRR* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4860 559 SUPERFAMILY Protein kinase-like (PK-like) 87 383 IPR011009 -
Mal7g4860 559 PANTHER CELL DIVISION PROTEIN KINASE 47 518 - -
Mal7g4860 559 Gene3D Phosphorylase Kinase; domain 1 80 176 - -
Mal7g4860 559 Gene3D Transferase(Phosphotransferase) domain 1 177 417 - -
Mal7g4860 559 MobiDBLite consensus disorder prediction 1 56 - -
Mal7g4860 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Mal7g4860 559 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Mal7g4860 559 Pfam Protein kinase domain 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4860 559 MobiDBLite consensus disorder prediction 459 489 - -
Mal7g4860 559 ProSiteProfiles Protein kinase domain profile. 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4860 559 SMART serkin_6 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4860 559 MobiDBLite consensus disorder prediction 409 428 - -
Mal7g4860 559 CDD STKc_CDK9_like 94 378 - -
Mal7g4860 559 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 47 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4860 Mal-Chr7 117136964 117140354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4860 86 410 Core Cell Cycle Gene Families AT5G10270 52.199 9.74e-118 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal7g4860 Pkinase 7.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4860 K08819 - gmx:100789359 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4860 7 117136964 117140354 Mal7g4860 7 117136964 117140354 ECH