Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4855 ATGGCAGCTTTTTCCTACCAGTACCAACAACCCTTTCTTGTTGACTCTGTATACTTCACCAATATAAACACTTCTCTTCCTTCTCATAATCATCAAGAACCCTCTCTCAGTAATCAAGAAACTAGTTGTGTTGTTGATCAAAACTCTAAGAATAGCTTAAGTAACAACCAGAGTCCTGAATCATCCATGGTAGTGGACAATCTTGAAAAGGGTGAACAAGTTACTCAGAAAGTTACTTCTATGGAGAAGAAGAGAAGAGTTAGAAATAAGACTTCTTTGAGTAGCCCCTTGTCTAAGGATATCTCAAAAGAAGGGAAAAGCAAAAAACAAAAGAGTAGTAGTGGTGAGGAGGTGAAAGGGGAGGAGAAGAAAAAAGAAGAGAAGAAGGATCAAAAGAAAAATATTGAAGAAGTTCCAACTGGTTATATCCATGTGAGAGCAAGAAGGGGTCAGGCAACAGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGAGAGAAAATAAGTGAAAGAATGAAGATATTGCAGCAACTTGTTCCTGGCTGTGATAGGGTAACTGGAAAGGCCCTTGTGTTGGATGAAATAATCAATTATGTACAGTCCTTACAAAATCAAGTAGAGTTCTTGTCAATGAAACTTGCTTCAGTGAATCCAATCTTCTTTGACTTTGCAATGGACCTAGACACACTCTTGGTTAGACCAGATCATCAGAGGTTAAATAGCACAACATCACCATCAACACCAATACCATCTGTACCATTATGCAGCTCCAACCATGCCACACCTTTTGCTGACACAAGCTTCCATCCTGCTAATAATGAATATGTTTTGGATTATCCAACTCCAGTTTTTCTTCAAGGGCAGAGGTCAAATACCTTCTTTGAGCACACTGATGGACCAATTTGGGACGCAGAAGATCAACGACAAAAGCTTCTTAATCCATATGGATTTGGCAACAATACATGTTCCTTAAATTAA 975 0.3908 MAAFSYQYQQPFLVDSVYFTNINTSLPSHNHQEPSLSNQETSCVVDQNSKNSLSNNQSPESSMVVDNLEKGEQVTQKVTSMEKKRRVRNKTSLSSPLSKDISKEGKSKKQKSSSGEEVKGEEKKKEEKKDQKKNIEEVPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQVEFLSMKLASVNPIFFDFAMDLDTLLVRPDHQRLNSTTSPSTPIPSVPLCSSNHATPFADTSFHPANNEYVLDYPTPVFLQGQRSNTFFEHTDGPIWDAEDQRQKLLNPYGFGNNTCSLN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4855 324 MobiDBLite consensus disorder prediction 28 75 - -
Mal7g4855 324 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 324 IPR024097 GO:0006355
Mal7g4855 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 216 IPR036638 GO:0046983
Mal7g4855 324 Coils Coil 118 138 - -
Mal7g4855 324 Pfam Helix-loop-helix DNA-binding domain 155 202 IPR011598 GO:0046983
Mal7g4855 324 SMART finulus 157 207 IPR011598 GO:0046983
Mal7g4855 324 Gene3D - 148 217 IPR036638 GO:0046983
Mal7g4855 324 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 324 - -
Mal7g4855 324 MobiDBLite consensus disorder prediction 101 159 - -
Mal7g4855 324 MobiDBLite consensus disorder prediction 28 159 - -
Mal7g4855 324 CDD bHLH_AtBPE_like 141 226 - -
Mal7g4855 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 201 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4855 Mal-Chr7 117078814 117081461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4855 1 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 45.041 2.81e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g4855 HLH 7.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4855 - - gmx:100796018 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4855 7 117078814 117081461 Mal7g4855 7 117078814 117081461 ECH