Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4848 ATGTTTGGGATGAGAGATCTGGAAGAAGAAAGAAACATGGCATCATCAGAGGTATCTATGAAGGGAAAAGGTGAAAACAACGTCGATGGTGTTGGAGATGGTCAAAATGGTTCTTCATCTTCATCAACAGGAAGAGAAGCTGAAGCTGCACTTTACAGAGAACTATGGCATGCTTGTGCTGGTCCTTTGGTAACGGTTCCAAGAGAAGGAGAGCTTGTGTTCTATTTTCCTCAAGGACATATTGAACAGGTGGAAGCTTCTACAAATCAAGCATCGGAACAGCACATGCCGGTGTACGATCTCCGACCTAAGATCCTCTGTCGGGTCATCAACGTTATGCTAAAGGCGGAGCCAGATACTGATGAGGTGTTTGCACAAGTGACTTTGGTACCAGAGCCAAATCAAGATGAGAATGCTGTTGAGAAAGAAGCTCCGCCGGCTCCTCCGCCGCGATTTCATGTTCATTCATTTTGTAAGACGTTAACGGCGTCTGATACTAGTACTCATGGTGGTTTTTCTGTTCTGAGACGTCATGCTGATGAATGTCTTCCTCCACTGGACATGTCAAAGCAACCACCTACACAGGAATTGGTGGCCAAGGATCTGCATGGGAATGAATGGCGTTTTAGGCATATCTTTCGCGGTCAACCACGAAGACATTTGCTGCAAAGTGGTTGGAGTGTTTTTGTCAGTTCTAAGAGGCTGGTTGCTGGGGATGCATTTATATTTCTAAGAGGTGAGAATGGGGAGCTTCGAGTTGGTGTCCGGCGTGCAATGAGACAGCAGGGGAATGTTCCGTCCTCGGTCATCTCTAGCCACAGTATGCATCTTGGTGTCCTTGCAACTGCTTGGCATGCTGTGTTGACTGGGACCATGTTTACTGTCTATTACAAGCCTAGAACCAGTCCAGCGGAGTTCATTGTTCCATATGATCAATACATGGAGTCTCTAAAAAACAATTATACCATAGGCATGCGCTTCAAAATGAGGTTTGAGGGTGAAGAGGCTCCTGAGCAAAGGTTTACGGGGACCATTGTTGGAATTGAAGACTCCGACTCCAAAAGATGGCCTACATCTAAATGGAGATGTCTCAAGGTTAGATGGGATGAGACATCTAACATTCCTCGTCCTGAGAGAGTTTCCCCATGGAAAATAGAGCCTGCTCTTGCTCCTCCTGCTTTAAATCCTCTGCCAATGCCCAGGCCTAAAAGGCCCCGAGCTAATGCAGTTCCATCATCCCCAGATTCTTCTGTTCTTACTCGTGAAGCATCATCTAAAGTAAGCATGGACCCTTTGCCCAGTAGTGGTTATCCGAGGGTCTTGCAAGGTCAAGAATCATCGACCTTGAGAGGGAATTTGGCAGAAAGCGACTCTTACACTGCAGAGAAGTCCGTTGCGTGGCCACCTGCAAATGATGAAGAAAAGATTGATGCTGTTTCTACTTCAAGAAGGTATGGATCGGAGAACTGGATGTCAATGTCAAGGCAGGAGCCAACGTATTCAGACCTTCTGTCAGGATTTGGTAGTGCCCGTGAAGGCAAACATAACATGCTTACACAATGGCCTGTAATGCCACCTGGTCTGTCGCTAAATTTCCTGCACTCTAATATGAAAGGCTCTGCACAAGGCAGTGATAATACAACTTACCAAGCTCAAGGGAATATGAGATACAGTGCCTTTGGTGATTACTCAGTGCTTCATGGACATAAAGTAGAAAATCCACATGGAAACTTTTTGATGCCACCACCACCTCCAACTCAATACGAGAGTCCCCATTCTAGAGAAGTGTCAAAGAAACAAATGTCTGCAAAAACAAGTGAGGCTGCAAAACCAAAAGACAGTGACTGTAAACTATTCGGATTCTCGCTTCTCAGTAGCCCGACTATGGCGGAGCCTTCAATATCTCAAAGAAATGTTTCAAGTGAGACAGCTAGTCACATGCAAATTTCATCACAACATAACACATTTGAAATTGATCAGAATCAGAAGTCCGAACAATCAAAGAGCTCCAAACCAGCAGATAAACAACTCACACTTGATGATCACGAGAAGCAGTTGCAAACTTCTCAACCTAATCTGAAAGATGTTCAACTCAAACCTCAAAATAGTTCTGCTAGAAGCTGCACGAAAGTTCACAAGAAAGGGATTGCGCTTGGTAGGTCTGTTGATCTTACAAAGTTTAGTGACTATGACGAATTAACCGCTGAATTGGATCAGCTGTTTGAATTTGGAGGTGAATTAATATCTCCACAAAAGGATTGGCTGGTTGTCTTCACTGATAATGAGGGTGACATGATGCTTGTGGGCGACGATCCATGGCAGGAGTTTTGTTCGATGGTTCGCAAAATTTATATCTACCCCAAAGAGGAGATTCAGAAAATGAGCCCCGGTACTTTGAGCTCGAAAAATGAAGAGAATCATTCAGCCACTGATGGGGGAGATGCACAAGAAACTAAATCTCAGCTGAATCAGTCAGCTTCAGATGATTGA 2490 0.447 MFGMRDLEEERNMASSEVSMKGKGENNVDGVGDGQNGSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANAVPSSPDSSVLTREASSKVSMDPLPSSGYPRVLQGQESSTLRGNLAESDSYTAEKSVAWPPANDEEKIDAVSTSRRYGSENWMSMSRQEPTYSDLLSGFGSAREGKHNMLTQWPVMPPGLSLNFLHSNMKGSAQGSDNTTYQAQGNMRYSAFGDYSVLHGHKVENPHGNFLMPPPPPTQYESPHSREVSKKQMSAKTSEAAKPKDSDCKLFGFSLLSSPTMAEPSISQRNVSSETASHMQISSQHNTFEIDQNQKSEQSKSSKPADKQLTLDDHEKQLQTSQPNLKDVQLKPQNSSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFGGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGTLSSKNEENHSATDGGDAQETKSQLNQSASDD* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4848 829 MobiDBLite consensus disorder prediction 389 407 - -
Mal7g4848 829 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
Mal7g4848 829 MobiDBLite consensus disorder prediction 630 650 - -
Mal7g4848 829 SUPERFAMILY CAD & PB1 domains 704 783 - -
Mal7g4848 829 Gene3D - 702 795 - -
Mal7g4848 829 MobiDBLite consensus disorder prediction 592 613 - -
Mal7g4848 829 MobiDBLite consensus disorder prediction 574 613 - -
Mal7g4848 829 Gene3D - 320 390 - -
Mal7g4848 829 ProSiteProfiles PB1 domain profile. 706 788 IPR000270 GO:0005515
Mal7g4848 829 MobiDBLite consensus disorder prediction 795 829 - -
Mal7g4848 829 MobiDBLite consensus disorder prediction 439 459 - -
Mal7g4848 829 MobiDBLite consensus disorder prediction 31 45 - -
Mal7g4848 829 MobiDBLite consensus disorder prediction 813 829 - -
Mal7g4848 829 Pfam Auxin response factor 283 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal7g4848 829 SUPERFAMILY DNA-binding pseudobarrel domain 153 286 IPR015300 -
Mal7g4848 829 SMART B3_2 157 259 IPR003340 GO:0003677
Mal7g4848 829 MobiDBLite consensus disorder prediction 410 431 - -
Mal7g4848 829 CDD B3_DNA 155 257 IPR003340 GO:0003677
Mal7g4848 829 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 36 813 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g4848 829 MobiDBLite consensus disorder prediction 1 16 - -
Mal7g4848 829 MobiDBLite consensus disorder prediction 388 465 - -
Mal7g4848 829 Gene3D - 154 259 IPR015300 -
Mal7g4848 829 MobiDBLite consensus disorder prediction 1 45 - -
Mal7g4848 829 Pfam AUX/IAA family 751 794 IPR033389 -
Mal7g4848 829 PANTHER AUXIN RESPONSE FACTOR 2 36 813 - -
Mal7g4848 829 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4848 Mal-Chr7 117011194 117015108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4848 13 827 B3 DNA Binding Superfamily AT5G62000 63.844 0.0 1074
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal7g4848 AUX_IAA 4.7e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4848 - - gmx:100780892 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4848 7 117011194 117015108 Mal7g4848 7 117011194 117015108 ECH