Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4846 ATGCATTTCTCGAATCTCGATGACACTCCTATGTTCCGCCAACAGCTGCATTGCTTGGAGGAAAGTGCAGAATCGTTACGCCTCAGAAGCTGCAAGTTCTACAAAGGATGTCGCAAGTATACGGAAGGGCTCGGAGAGGCATATGACGGGGACATCGCATTTGTAAGCTCCCTTGAATGTTTTGGAGGAGGGCATAGTGATCCTCATTTCGTTGCTTTGGGAGGACCTGTGATGAACAAGTTTACCATTGCTTTGAGAGAAATCAGTACATACAAGGAACTTCTTCGGTCACAGGTAGAGCACATGATTGATGACCGGCTACTACAAATTGTCAATGTTGACATCAATGAAGTCAAGGAAGCTCGTAAGCGTTTTGACAAAGCTGCCCTTGTATATGACCAGGCACGTGAAAGGTTTATGTCACTGAGAAAAAGCACAAAGATTGATATCGCCACCGTCATAGAAGAGGAATTGAAGAATGCAAGAACATCGTTTGAGGAAGCCCGTTTCAGTCTGGTTGGTGCTCTTAATAACATTGAGGTCAAGAAGAGATTTGAGTTTTTAGAGGTTGTCACCGGAATAATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTACTACATCAGATGGAACCTTTCATTAGTGAGGTTTTGGATTATGTACAACAGTCAAAAGAAAATTTCGATAAGGACCAGATTTTACTGTATAAAAAAATGCAAGAATACAAAAAACAAGTTTATCAAGATAGTAGGCTGTCCTTGAATGGCTCTCCTAGTGGAGACTCTGCTGCGCATCCTTTTTCTAGGATATCAAATGAAGTAGTAGATGTTGTAAAGGAATCTGCCGCAAATGGAAAGGTTCAAATCATTCGACAAGGATATCTTTCAAAGCGATCTTCCAATTTGAGAGCTGACTGGAAAAGAAGGCATTTTGTTCTAGATAGTCGAGGAATGCTGTACTACTACCGCAAACCATGTAGCATGTCATATGGCAGCAATCAATCATCTCCAAGGAAGAATAGTGCCACTGAAAATGGTTCTGGGCTTCTGAGTCGATGGCTTTCTTCTCATTATCATGGGGGTGTCCATGATGAAAGGTCTGTAGCACGTCATACTGTAAATCTGCTGACGTCAACTATCAAGGTTGATGCAGATCAGTCTGATTTAAGATTTTGCTTCAGAATAATTTCTCCATCAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATGGAAAAGATAAATGGAGTAATTGCCTCCTTGTTGAGTGTCCAGACACTAGTAGGATCACCTCTATCAGCTGACTCAGAAAATGGTGACTCTTACTCTGCCATCAAGAGTGCCATGTTTGAAAGTTCTCCAGATAAAGATCACACTGAGGTCAAAAAGTCTGCATCCAAGAATTTCTCCCCTAGGAACCACTTACGTTCATCTAAAAGTATGCAGTTGCAAAAACACAGTATAATAAATGAAAAACCTATTGATGTTCTTAGAAAGGTGAGCGGGAATGACAAATGCGCTGATTGTGGTAAACTTGGACCAGACTGGGCATCTTTAAACCTCGGCATCCTTATATGCATTGAATGCTCTGGTGTTCATCGTAATCTTGGAGTGCATATATCAAAAGTAAGATCACTGACACTTGATGTGAAAGTCTGGGACCACTCTGTCTTAAGTATGTTTGAGTCCCTGGGCAATCATTTTGCAAACTCAGTTTGGGAGGAGCTGTTATGTTCAAGGAGTCCTTCACAAGATGTTGACACCTCTGTTGGTTCATCCAAGGCAAACAGAGACAACCTATTTCATGCAAGAAAACCAAAACATGATGATTCTATTTTATTAAAGGAAAGGTTCATTCACGCAAAGTATGCTGAGAAAATATTTATTTGCCGGACAGAGAAAAACCTTGCACAACAGATGTTGAAAAGCATCTGTGCTAATGATAAGAAGGCAGTGTACCAGCACATTGTCAAGTCAGGTGTGAATGTCAATACCATCAGTAGGCAAGCATTTTCTGGTGACTCTTTCAACGCGGCTTCTTTCATTTATTCAAACATTTCATCTGAAAATGAGAGTCAGTTGATTGAGGATGTACAAAATGGTTCTAGTGTGCTTCACCTGGCTTGCCTAACAAGTGACGCTGGCATGGTGGATCTGCTCTTACAGCATGGGGCAGATATAAACGCTTATGATTCAAGAGGTCGGACACCGCTACATTACTGTATTATCAGAGGGAAGCCCGCAGCTGCAAAAGTGCTTCTTATGAGGGGGTCCAATCCACATGTAGCTGACAAGGAAGGCTACACTCCTTTTAAACTTGCATCAGAAACGAGCTGTATTGGCAATGAAATTCTCACTCTCTTAGCAAGCAGATGA 2397 0.4159 MHFSNLDDTPMFRQQLHCLEESAESLRLRSCKFYKGCRKYTEGLGEAYDGDIAFVSSLECFGGGHSDPHFVALGGPVMNKFTIALREISTYKELLRSQVEHMIDDRLLQIVNVDINEVKEARKRFDKAALVYDQARERFMSLRKSTKIDIATVIEEELKNARTSFEEARFSLVGALNNIEVKKRFEFLEVVTGIMDAHLRYFQQGYQLLHQMEPFISEVLDYVQQSKENFDKDQILLYKKMQEYKKQVYQDSRLSLNGSPSGDSAAHPFSRISNEVVDVVKESAANGKVQIIRQGYLSKRSSNLRADWKRRHFVLDSRGMLYYYRKPCSMSYGSNQSSPRKNSATENGSGLLSRWLSSHYHGGVHDERSVARHTVNLLTSTIKVDADQSDLRFCFRIISPSKNYTLQAENAVDQMDWMEKINGVIASLLSVQTLVGSPLSADSENGDSYSAIKSAMFESSPDKDHTEVKKSASKNFSPRNHLRSSKSMQLQKHSIINEKPIDVLRKVSGNDKCADCGKLGPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDHSVLSMFESLGNHFANSVWEELLCSRSPSQDVDTSVGSSKANRDNLFHARKPKHDDSILLKERFIHAKYAEKIFICRTEKNLAQQMLKSICANDKKAVYQHIVKSGVNVNTISRQAFSGDSFNAASFIYSNISSENESQLIEDVQNGSSVLHLACLTSDAGMVDLLLQHGADINAYDSRGRTPLHYCIIRGKPAAAKVLLMRGSNPHVADKEGYTPFKLASETSCIGNEILTLLASR* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4846 798 CDD PH_ACAP 293 430 - -
Mal7g4846 798 ProSiteProfiles PH domain profile. 290 426 IPR001849 -
Mal7g4846 798 Gene3D - 640 795 IPR036770 -
Mal7g4846 798 SMART 5bar 5 218 IPR004148 GO:0005515|GO:0005737
Mal7g4846 798 CDD BAR_SFC_plant 15 215 IPR035670 -
Mal7g4846 798 Pfam BAR domain of APPL family 6 232 - -
Mal7g4846 798 ProSiteProfiles Ankyrin repeat region circular profile. 707 738 - -
Mal7g4846 798 ProSiteProfiles ARF GTPase-activating proteins domain profile. 498 643 IPR001164 GO:0005096
Mal7g4846 798 Gene3D Arfaptin homology (AH) domain/BAR domain 4 250 IPR027267 -
Mal7g4846 798 CDD ArfGap 501 630 - -
Mal7g4846 798 SUPERFAMILY PH domain-like 203 425 - -
Mal7g4846 798 Gene3D - 283 435 IPR011993 -
Mal7g4846 798 Pfam Ankyrin repeats (many copies) 709 761 IPR002110 GO:0005515
Mal7g4846 798 SMART arf_gap_3 498 644 IPR001164 GO:0005096
Mal7g4846 798 Coils Coil 118 138 - -
Mal7g4846 798 PRINTS HIV Rev interacting protein signature 529 546 IPR001164 GO:0005096
Mal7g4846 798 PRINTS HIV Rev interacting protein signature 510 529 IPR001164 GO:0005096
Mal7g4846 798 PRINTS HIV Rev interacting protein signature 552 573 IPR001164 GO:0005096
Mal7g4846 798 ProSiteProfiles Ankyrin repeat profile. 707 739 IPR002110 GO:0005515
Mal7g4846 798 SUPERFAMILY ArfGap/RecO-like zinc finger 497 637 IPR037278 -
Mal7g4846 798 MobiDBLite consensus disorder prediction 460 483 - -
Mal7g4846 798 Pfam Putative GTPase activating protein for Arf 501 636 IPR001164 GO:0005096
Mal7g4846 798 PANTHER CENTAURIN/ARF 1 798 IPR045258 GO:0005096
Mal7g4846 798 ProSiteProfiles Ankyrin repeat profile. 740 772 IPR002110 GO:0005515
Mal7g4846 798 SMART PH_update 291 428 IPR001849 -
Mal7g4846 798 SUPERFAMILY Ankyrin repeat 649 785 IPR036770 -
Mal7g4846 798 MobiDBLite consensus disorder prediction 460 474 - -
Mal7g4846 798 SUPERFAMILY BAR/IMD domain-like 5 313 IPR027267 -
Mal7g4846 798 Pfam PH domain 292 425 IPR001849 -
Mal7g4846 798 Gene3D Arf GTPase activating protein 478 639 IPR038508 -
Mal7g4846 798 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 1 798 - -
Mal7g4846 798 SMART ANK_2a 740 769 IPR002110 GO:0005515
Mal7g4846 798 SMART ANK_2a 707 736 IPR002110 GO:0005515
Mal7g4846 798 ProSiteProfiles Ankyrin repeat region circular profile. 740 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4846 Mal-Chr7 116950279 116959892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4846 510 636 C2H2 Transcription Factor Family AT4G05330 43.511 3.70e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4846 K12489 - gmx:100792517 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4846 7 116950279 116959892 Mal2g1374 2 16516347 16523867 PCT