Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4842 ATGACATTTAGCTCGGAAGAGGAAGTTACCTTGTATTACATGAATTATGCTCGACGTATGGGTTTTGGAATGAGTAAAATAAGTTCAAAAAATGGAGATGATGGGAAAAAATATTTTACTTTAGCATGTAGTCGTGCAGGAAAGTATATGAGCACTTCAAAGAATCTTTTGAAGCCAAATCCTATCACTAAAACACAATGTAAGGCAAGATTGAATGCATGTATAGGTTTGGATGGAGGAGTTGTAGTTACAAGTGTTATTCTTGACAATAATCATGACCTTAGCCCAAACAAAGCACGGTATTTTAGATGTAACAAGAATATGGGGTCTCACATAAAAAAGAAATTAGAGATTAATGATCAAGCAGGTATCAATGTCAGTAGAAATTTTAGATCTGTGGTTGTTGAAGCAAATGGTTATGAGAATCTCACATTTGGTGAAAAAGACTGCAGAAACTATATAGACAAGATAAGGCGACTAAGGCTTGGGACAGGAGACGCTGAAGCAATACAAAACTATTTTGTTAGAATGCAAAAGCAAAATAGTCAATTTTATTATGTAATGGATGTGGATGATGATAGCCGTTTAAGAAATGTATTCTGGGCAGATGCGAGATGTAGGGCTGCATATGAATACTTTGGTAAAGTCATAACTTTTGACACCACCTACCTAACAAATAAATTTGACATGCCTTTTGCCCCTTTTGTTGGTGTCAATCATCATGGTCAGTCTATGTTGTTGGGTTGTGCACTTTTATCAAACGAGGATGCTAAAACTTTTACTTGGTTGTTCACAACATGGTTAGAATGCATGTATGGACGCGCTCCAAATGCCATTATCACTGATCAGGATAAGGCAATGAAAAAGGCGATTGAGGTTGTCTTCGCAAAAGCTCGTCACAGATGGTGCTTATGGCATTTAATGAAAAAGATACCAGAAAAGTTTGGTAGGCACTCAGATTATGAGTCTATTAAAACACTTTTGCATGATGCTGTGGGAAAAATGATTGAATGTTATGAACTACATGACAATGAATGGTTAAAAGGGATATTTGATGAGCGTCATCGTTGGGTTCCTGTGTATGTGAAGGACGTGTTTTGGGCTGGGATGTCAACTACACAACGAAGTGAGAGTATGAACTCATTTTTTGATGGGTATGTAAGCTCAAAGACATCATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAAAGATAAGATTGAAAAGGAAAGCAGGGCGGATTTTGGTTCATTTAATTCAGTAGTTGCTTGTGTAAGTCATTTTGGCTTTGAGTCACAATTCCAAAAATCATTTACCAATGCAAAATTCAAAGAATTTCAAGTAGAAGTTGCTTCTATGATATATTGCAATACTTCATTTGAGGAATTGGATGGTTTAAATTCTATATTTTCTGTGATAGAAAGTAAGAAAGTATATGACAAAACAAAAGATGTGGTATTCAAGGTGTCCTTCAATGAAAAGGACTTTGAGTTACAATGTACCTGCTGCTTATTTGAGTTTAAAGGCATTTTGTGTAGACACATCATTTGTGTCCTTAAACTCTCTGGTAAAACAGAGTCAGTGCCATCTCATTATATTTTTTCTCAGTGGAGGAAGGATATAAAGCGACGGCATAGACTTATTAAATGTGGTTTTTATAACTTGAATGGAAATGCTGAGTTACAGCGTGTTAGTAAAGCCTGTGATGCCTTTTACGAAGTTGCTTCTACGGGGATAAGTACTGAAGAAGATTTGCTGAAAGTGATGAATTGGATCAAGGACTTGAAAATTGAGTTAACATGTAAAAAAACATCTCCTAGAATTATAGAAGAAGTTAATTCAACTCAAAATCAAGTGCCTATCATTCTGGATCCCAAAGTTGCTCGAGGCAAAGGGCGTCCTCCTTTAAAACGAAAGGCTTCTAAAGTTGATCAAATTATAAAGAAGAAGCTTGCAGGAAAAAAAACTCAAAGTAGCCAAAAAAGAACAATTTCTCAAAGTTCAGAAGAGGTGATTTTGAGTTTGTTAAATTTATTTTCTTGA 2046 0.3548 MTFSSEEEVTLYYMNYARRMGFGMSKISSKNGDDGKKYFTLACSRAGKYMSTSKNLLKPNPITKTQCKARLNACIGLDGGVVVTSVILDNNHDLSPNKARYFRCNKNMGSHIKKKLEINDQAGINVSRNFRSVVVEANGYENLTFGEKDCRNYIDKIRRLRLGTGDAEAIQNYFVRMQKQNSQFYYVMDVDDDSRLRNVFWADARCRAAYEYFGKVITFDTTYLTNKFDMPFAPFVGVNHHGQSMLLGCALLSNEDAKTFTWLFTTWLECMYGRAPNAIITDQDKAMKKAIEVVFAKARHRWCLWHLMKKIPEKFGRHSDYESIKTLLHDAVGKMIECYELHDNEWLKGIFDERHRWVPVYVKDVFWAGMSTTQRSESMNSFFDGYVSSKTSLKQFVEQYDNALKDKIEKESRADFGSFNSVVACVSHFGFESQFQKSFTNAKFKEFQVEVASMIYCNTSFEELDGLNSIFSVIESKKVYDKTKDVVFKVSFNEKDFELQCTCCLFEFKGILCRHIICVLKLSGKTESVPSHYIFSQWRKDIKRRHRLIKCGFYNLNGNAELQRVSKACDAFYEVASTGISTEEDLLKVMNWIKDLKIELTCKKTSPRIIEEVNSTQNQVPIILDPKVARGKGRPPLKRKASKVDQIIKKKLAGKKTQSSQKRTISQSSEEVILSLLNLFS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4842 681 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
Mal7g4842 681 Pfam SWIM zinc finger 492 519 IPR007527 GO:0008270
Mal7g4842 681 PANTHER OS03G0843700 PROTEIN 1 564 - -
Mal7g4842 681 Pfam MULE transposase domain 216 310 IPR018289 -
Mal7g4842 681 SMART 26again6 499 526 IPR006564 GO:0008270
Mal7g4842 681 ProSiteProfiles Zinc finger SWIM-type profile. 488 524 IPR007527 GO:0008270
Mal7g4842 681 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 564 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4842 Mal-Chr7 116893685 116895768 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal7g4842 MULE 1.6e-34 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4842 - - cam:101506732 1008.05