Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4826 ATGGATCCCAATGACCAAAAGAAGAATAAGTTCGATGATGGTATGATACATCAGAATACTAGGGCAAACTCCATGAAAACCATAGAGAAGAAGAAAAGTTTAGCATCAACTTCTAAGTCTTCTAAAGTTTATGATAAACCAAAGGGCCGTCATCATGATGAAGGATCAACAAGTTCAAAAATTCACAAGTGTGAATTTTGTAACAAAATTTTTAGGTGTGGGAAAGGTTTAGGTGGTCACAAAAGAATCCATCTTCAAGCTCTAAGGAAAGAGGGTGAGTCGAAAACAAAGATTGGTTGCAATTCTTCTAATGATAATGATGATGGAAAATTAAGTTGTGAAGTTTGCAAAAAGAATTTCCCATCCAATAAGGCATTGTATGGTCACATGAGATCTCACCCAGAAAGAGAATGGAGGGGTATGAACCCTAATAAGAATAATATTGATTATTATGATGATGATGATCAAGATCAATATTTTCTTAGTGCATCCAATTCCAAAGGATTGGCTATTGATGGTGAGTCAAAATCTTGGCCACCAAGATCGTTTAAAACTGATAAAAGGGGCCGAAAACGTATTTTGAGCTATGAAGTTGTTAATGCTTCTCAAATACTCATGTATATGTCTACGGATAAATGTTTACATGACAACCTCAATGAGAGTTTGGGTAATGAGGATAAGGAGGAGAAAATGCTACCTAGTACTAGTTGTCTTGTTGGGGATATTGATGAAACAAAATTGAAGAATGACAATAACAAAAGAAGGAAGATGTTGGTGAAATTGAAGTAA 789 0.3498 MDPNDQKKNKFDDGMIHQNTRANSMKTIEKKKSLASTSKSSKVYDKPKGRHHDEGSTSSKIHKCEFCNKIFRCGKGLGGHKRIHLQALRKEGESKTKIGCNSSNDNDDGKLSCEVCKKNFPSNKALYGHMRSHPEREWRGMNPNKNNIDYYDDDDQDQYFLSASNSKGLAIDGESKSWPPRSFKTDKRGRKRILSYEVVNASQILMYMSTDKCLHDNLNESLGNEDKEEKMLPSTSCLVGDIDETKLKNDNNKRRKMLVKLK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4826 262 ProSitePatterns Zinc finger C2H2 type domain signature. 64 84 IPR013087 -
Mal7g4826 262 MobiDBLite consensus disorder prediction 1 15 - -
Mal7g4826 262 SMART c2h2final6 111 133 IPR013087 -
Mal7g4826 262 SMART c2h2final6 62 84 IPR013087 -
Mal7g4826 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Mal7g4826 262 SUPERFAMILY beta-beta-alpha zinc fingers 60 133 IPR036236 -
Mal7g4826 262 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Mal7g4826 262 Gene3D Classic Zinc Finger 60 133 - -
Mal7g4826 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 62 84 IPR013087 -
Mal7g4826 262 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 12 230 IPR044653 GO:0003700
Mal7g4826 262 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 12 230 - -
Mal7g4826 262 MobiDBLite consensus disorder prediction 1 58 - -
Mal7g4826 262 MobiDBLite consensus disorder prediction 43 58 - -
Mal7g4826 262 Pfam C2H2-type zinc finger 62 86 - -
Mal7g4826 262 Pfam C2H2-type zinc finger 113 135 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4826 62 150 C2H2 Transcription Factor Family AT2G26940 30.508 4.96e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal7g4826 zf-C2H2_6 4.1e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4826 - - mtr:MTR_5g098470 377.096