Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4816 ATGAAACACAGCACAGCACAGCACAAACTTAATTCAACCATGGGTAGATCCCCTTGCTGTGAAAAACAACACACAAACAAAGGTGCTTGGTCTAAGGAAGAAGACGAGCGTCTCATCAACTACATCAAACAACACGGTGATGGTTGCTGGCGTTCTCTCCCCAAAGCCGCAGGCTTGGCAAGATGTGGAAAAAGCTGCAGACTGAGATGGATCAATTATCTGAGACCTGATCTCAAGCGTGGAAACTTCACTCGTGAGGAAGATGAACTTATCATTAGCCTCCACGCTGTCGTTGGAAACAAATGGTCTCAAATTGCTCAGAAATTGCCAGGAAGAACGGACAATGAGATCAAGAACTATTGGAACACACATATAAAGCGCAAACTATATAGCCGTGGAGTTGATCCTTCAACACATGAGCCACTCAAAACCTTGTCCGGTGCCGCCTCAGCCAGTACTTCCTCAACAACCACCGCCTCTGCGGCAGCTGCTTCTCCGATTGTTATTAATAACAACAATCCTGCAGTACTTCCTGTGGTCCCCACAAACAACGAGAGAAACGAGTTTCAGTTATTCAGTACTTTCGGTGGCTCTCTGAAGTTGGTTGTTGCAACTGATTCTGGTGGCGTTGAAGAATCGGTTTCTAACAGTAGCAGTGGTGTTACGATGGAGGAAATAGCTTGTCCTCCACAAATAAACTTGGAACTTTCATTGGCTACAACTTCTCATGAACAACCACAACCACAACCACAAGGTCTGTGTCTTTGTCGTCAAATAGCTTTAGGGTTACATGGTGGTGGTAACCAAACTTGTTGCTGCAATAATACCATGCCTATCGTTGGTGTTTCAACTTCTTCTGCTGCTCCACCACCTGCTACCACCGGCACCGCCAATGGTTTTTTCAAATTTTTCGGAGCTGGGGATTACAAGTTTTGA 936 0.4551 MKHSTAQHKLNSTMGRSPCCEKQHTNKGAWSKEEDERLINYIKQHGDGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTREEDELIISLHAVVGNKWSQIAQKLPGRTDNEIKNYWNTHIKRKLYSRGVDPSTHEPLKTLSGAASASTSSTTTASAAAASPIVINNNNPAVLPVVPTNNERNEFQLFSTFGGSLKLVVATDSGGVEESVSNSSSGVTMEEIACPPQINLELSLATTSHEQPQPQPQGLCLCRQIALGLHGGGNQTCCCNNTMPIVGVSTSSAAPPPATTGTANGFFKFFGAGDYKF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4816 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Mal7g4816 311 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Mal7g4816 311 MobiDBLite consensus disorder prediction 132 151 - -
Mal7g4816 311 MobiDBLite consensus disorder prediction 1 28 - -
Mal7g4816 311 Gene3D - 82 129 - -
Mal7g4816 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Mal7g4816 311 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Mal7g4816 311 SUPERFAMILY Homeodomain-like 25 121 IPR009057 -
Mal7g4816 311 SMART sant 79 127 IPR001005 -
Mal7g4816 311 SMART sant 26 76 IPR001005 -
Mal7g4816 311 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 14 246 - -
Mal7g4816 311 CDD SANT 82 125 IPR001005 -
Mal7g4816 311 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Mal7g4816 311 Pfam Myb-like DNA-binding domain 80 124 IPR001005 -
Mal7g4816 311 Gene3D - 27 79 - -
Mal7g4816 311 PANTHER TRANSCRIPTION FACTOR MYB7 14 246 - -
Mal7g4816 311 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4816 Mal-Chr7 116613045 116614484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4816 14 239 MYB Transcription Factor Family AT4G38620 56.223 6.20e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal7g4816 Myb_DNA-binding 4.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4816 K09422 - gmx:778033 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4816 7 116613045 116614484 Mal7g4816 7 116613045 116614484 ECH
Mal7g4816 7 116613045 116614484 Mal2g1428 2 17105879 17107387 PCT