Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4808 ATGCCTCTTTTAAGGAGAAAGCCTCTTGCCTTGGTTGAGCCTCCTGAGGATTTGAAGCCAGATGAGCATGTTTACCAAGTTCGATTTACAAAGGAAATATTTCGAGATTATCACGATTACTTGCACCGTTTGAATCTATACCGCCAGAGGGTCTGGGCTTGTAAGGTCACTGGTAAAACTGCCTTGACTTATGAAGAGGCTTTGGTGTCAGAACAACGAGCTACTGAGAAATTCCTACAGTTTCCTAAAGAATTTATGACTCCTGCTTTAAGGATCATTCAGTACAGTATGCTCCCTTTGAGGGAGCTTGCCGATTCTCTTGCTGAAAAATTGCAGGAGCGTTTGTTTGTTGGTGCCGAATTATATGGGAAAAAAGATGACAGTGAATGTCCATGCAAAATATTAAAAGTCATCCATGAAGGAGCCAACAAATACCGTTATGAGGTAGCTTGGCTTGACAAAAACAAGAATGTAAGTGAAAAAACAGAAGTCCATGCAGAAGATTTGGTGCAAAAGAAACCCCTTTTTAGTAGAAATATTCTAAAATCTTTCATCCGGGAATCTACATATCGAAATGCCCCTTGGGTTTTACATGACAAACTGGCACAAAATCATGGCATCTCCACTGATGTTCCGGAGGAGTTAAGAGGAAAGGTTTTTCTCAAAGATGGACTTATAGTTTGCTCCAAGAAAAGGAATAAAGAGGAATCAATGGAAGAAGCCGATGAACATAAAAGGAAGAAGTTGGATGGGACACTAGTCAATGATTCTGCACAAGAGAAAGAACATGAAGAACACAAGGATATACCAGTCAAATATCCCATTGATGATCTATTGGTGAAGCCTAGTCCAGATGACCCTGTTTTCACCGACCGTCCTTCTCCATCAAGAGACTTCAATGTTCCAATGCATTGTGTTGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAAACAGTTACACTTGTGGCCCTACTCTTTGGAAGAATTCGAAAATGCAATCTGCCATAAGGATGGCAATGCGGTTCTCCTTGTCGAATCTCATGCTGCACTTTTTCGAGTTCTTATCAAAGATGATGGTGAATACACTTCAGCTGTAGAGAAACGAAGTGTGAAGAAGATAACAATGGTTAACTGGAGAGAATATTTATGCGATTTTCTAGAAATGATCAATATTCCTCGATTACGGCACTGTGAAGGAACCATAAAACGGGGACATTATTGCCTTGTAGATGCCGATGCTAAATTAGAAATCTTAAGTGAGTTGGTCAATCGAGCCCTTGAAACTGCAATTTTCAGGGAAAAGTTGGATGAGTTTATTGAACAGCGGCAGGAACTTGGGGCCTCTAGAAGGGAAGAAGCACTAGAAGATGGTAGAAAGAGAAGAGAAAAAAAAGAGAGGTTGAAAGCCGACTCAGAAAGCAATGGGAATCATATTAACAGTGCTAATATCCTTTCAAACAACAATCACATTAAACAAAATGGACATGTGGGGAAGAAAATAAATGGAGAGATAGAATCATCTAGGCAAAACAATTCACTGGGTAAAAGTGGGATTAAGCATTCAAGCCCTGCTTCGAAAAAGACTCCAAAAAACCTGGATACAGAGCAGAAAGAACCAGGAGAAAACGGAAAAGAATTATCCAGAAAGGAATTACAGAAACAGATGAAGGCTGATAAGGATCCATCAGAGAAGAATAGTATAGAGCGGAGGAGAGAATACTTTGAACGGGAGATGGAGAAACGGCCTATTAGTAGAAGCCCATTAGGTAAAGACCGAGATTACAATAGGTATTGGTGGTTCCGTCGCGACGGGAGGATATTTGTTGAAAGCTGTGACTCCAAGGAGTGGGGATACTACAGCAGCAAGGAAGAGCTTGATGCATTGATGGGTTCGCTGAATTGCAAGGGTGAGCGGGAAAGGGCACTGCAAAAACAACTGGAAAAAAATTATAGTGGTATATGCGCAGAACTGCAGAAAAGATCAAAGGATTCGATGCAGAATGTTGCGAATGATGAGTCTGTGCTTCGAAGGTCTACTCGTGTTCGAGCTCCACCCAGGGAAAATCCTGCCAATGCTTTCCTCAAATATGTTAACAAGTGGAAAGAAGAGTAG 2124 0.4101 MPLLRRKPLALVEPPEDLKPDEHVYQVRFTKEIFRDYHDYLHRLNLYRQRVWACKVTGKTALTYEEALVSEQRATEKFLQFPKEFMTPALRIIQYSMLPLRELADSLAEKLQERLFVGAELYGKKDDSECPCKILKVIHEGANKYRYEVAWLDKNKNVSEKTEVHAEDLVQKKPLFSRNILKSFIRESTYRNAPWVLHDKLAQNHGISTDVPEELRGKVFLKDGLIVCSKKRNKEESMEEADEHKRKKLDGTLVNDSAQEKEHEEHKDIPVKYPIDDLLVKPSPDDPVFTDRPSPSRDFNVPMHCVGDLLMVWDFCTSFGKQLHLWPYSLEEFENAICHKDGNAVLLVESHAALFRVLIKDDGEYTSAVEKRSVKKITMVNWREYLCDFLEMINIPRLRHCEGTIKRGHYCLVDADAKLEILSELVNRALETAIFREKLDEFIEQRQELGASRREEALEDGRKRREKKERLKADSESNGNHINSANILSNNNHIKQNGHVGKKINGEIESSRQNNSLGKSGIKHSSPASKKTPKNLDTEQKEPGENGKELSRKELQKQMKADKDPSEKNSIERRREYFEREMEKRPISRSPLGKDRDYNRYWWFRRDGRIFVESCDSKEWGYYSSKEELDALMGSLNCKGERERALQKQLEKNYSGICAELQKRSKDSMQNVANDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4808 707 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Mal7g4808 707 MobiDBLite consensus disorder prediction 232 267 - -
Mal7g4808 707 MobiDBLite consensus disorder prediction 511 533 - -
Mal7g4808 707 MobiDBLite consensus disorder prediction 477 498 - -
Mal7g4808 707 MobiDBLite consensus disorder prediction 534 573 - -
Mal7g4808 707 MobiDBLite consensus disorder prediction 511 573 - -
Mal7g4808 707 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Mal7g4808 707 Pfam DDT domain 304 361 IPR018501 -
Mal7g4808 707 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 705 - -
Mal7g4808 707 SMART testlast3 303 364 IPR018501 -
Mal7g4808 707 MobiDBLite consensus disorder prediction 452 476 - -
Mal7g4808 707 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 589 653 IPR028941 -
Mal7g4808 707 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Mal7g4808 707 MobiDBLite consensus disorder prediction 452 498 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4808 305 361 Homeobox Transcription Factor Family AT1G28420 47.368 1.39e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mal7g4808 WAC_Acf1_DNA_bd 6.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4808 - - gmx:100789956 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4808 7 116413217 116420154 Mal7g4808 7 116413217 116420154 ECH