Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4782 ATGCATGCTGTGCCAGTCTGGAAGTACACATATACCTTTCGCCGGAATCCCAATAGGCACTGTTTCTCCACCGGCTGGAAGTACGCATATGCCTTTCGCCGGAATCCCGATAGACACCGTTTCTCCACCGGCTGGACTACATTTGTGCACGAGAAGAAACTCGTGGCCGGTGATTCTGTTGTTCTCGTGAAAAACTCTGCCGGACAGATATATGTTGGATTCCACCGGCACAAGAAGGAGGCTGGAAGAGGGAGAACGGAATTGGCGGAGTGTAAAACAGAGTTTGAAGTTGTGTATTATCCAAGTCCTAATTGGTTTGACTTTGTGGTGGATGCTAAGGTTGTTGATGACGCTATGAAGATTGTTTGGAAATCTGGAATTGGAGTCAAGCTTGCTTTGAATACTGAAGAATCATCAAATTCAAAGATGAAAAATGTTCAGCCCCAGGGGACAATCTCTAATGTGTCCAATGCTTCTTCTAATGCCCCTAATTGGCGCATTCTTCAGGTTAACTGGGATGAATCCGGAAGCTCGCAGAATCCAAACCTGATAAACCCTTGGCAGGTTGAACTTTACGACATATACCTGCACCGCCAATTCGATTCCCCCCAAGAAAATGTCCTAGAAAGAATTAGTAACTCAGTGAAAATTAGTTTTTCAAGACAGAATATTCCATATGCCAATAGCTCCTATCTGGAAAAAATATAA 708 0.4407 MHAVPVWKYTYTFRRNPNRHCFSTGWKYAYAFRRNPDRHRFSTGWTTFVHEKKLVAGDSVVLVKNSAGQIYVGFHRHKKEAGRGRTELAECKTEFEVVYYPSPNWFDFVVDAKVVDDAMKIVWKSGIGVKLALNTEESSNSKMKNVQPQGTISNVSNASSNAPNWRILQVNWDESGSSQNPNLINPWQVELYDIYLHRQFDSPQENVLERISNSVKISFSRQNIPYANSSYLEKI* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4782 235 ProSiteProfiles B3 DNA-binding domain profile. 26 78 IPR003340 GO:0003677
Mal7g4782 235 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 196 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal7g4782 235 Gene3D - 26 78 IPR015300 -
Mal7g4782 235 PANTHER AUXIN RESPONSE FACTOR 17 26 196 - -
Mal7g4782 235 SUPERFAMILY DNA-binding pseudobarrel domain 26 77 IPR015300 -
Mal7g4782 235 Pfam Auxin response factor 87 169 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal7g4782 235 Gene3D - 123 196 - -
Mal7g4782 235 Pfam B3 DNA binding domain 26 77 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4782 Mal-Chr7 116108685 116110318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4782 26 200 B3 DNA Binding Superfamily AT1G77850 30.973 2.34e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal7g4782 Auxin_resp 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4782 - - mtr:MTR_5g060780 175.637