Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4780 ATGGGCAAGGAAAATGAGTCACCTGTGAAGAAAGAAGTTAGTGATGATGGCTCCTCGAGTGTTGAGATGCGAGATTTAGAATCTCATTCTCGACTTAGTTTGGAGAGGGAGATGGGCTTGGCGAGTTGTCGCGTGTGCCAGTGTGTTGAGTCTGATAAACGGGGAGATGCTGCCCTAGAATTTTTGGGCATCACCCCAATTATAGAACGCAAGGACGAAGTGAAGTCTGAAAGCAAGGTGGAAGTAAAGTCCGACAGCAAGGGGGAAGTAAAGTCTGATGGCAAGGAAATTCCAAAAGATATGATTCCTAGCAAAAACTTTGAAAGCAAATCTGGGATGATGGAATTTGTAGGCCCTGATGGGGAGGTTTTCGTTTGTAAGAATGATTTAGAAATTGGTTTGTCTCATGAAGATAAGTTGATCGAACTTGGTTGTTGTTGTAAAAACGACCTTGCTTTAGTACATTATGCTTGTGCACTCAAGTGGTTTATCAATCATGGATCTACCATTTGTGAAATATGTGGACATATAGCAAATAATATCAAAATAGCTGACTTCAACAAGGTTGTTGGTTCATTAAAAGAATATGAAACACTGAGGGAAAGAACTGTCAATGGAGATCTTGGTCCCGCACAAGTTCATTCAAATACTGGTGTAGATCCTGATGCGGTGGCTGCAATCCGAAGGCAACGGTTAAGTGAAATTGCACTATGGTTTTGTCCTCATAATAGCAATAACTTTAACAATAGTAGAAATGTGGACTTAGTTTCACAACTTGTTTCTGAGCAGCCTTTGAATTTTATTGTCGAAGAACCTGACCCCGTACAGAATACCCGAACTAAGTGGGCTGTAGAATGTACAGGGATCCTGCTTGCTACAGGGCTGCTTACCATCACCCTTGCATGGCTTATAGCTCCTCATGTTGCGAAGAAAACTGCAGGACGTGGTCTTCGTATCCTACTTGGCGGTGTTTGTGCTTTAACAGTGGTGATTTTCTTCCGCTTCTTTGTGCTTACCAGAATCAGGTATGGACCTGCACGTTATTGGGCAATATTATTTGTTTTCTGGTTTCTTGTTTTTGGAATATGGGCTTCTCGGACGCACAGTGCTCATACAACATGA 1122 0.4216 MGKENESPVKKEVSDDGSSSVEMRDLESHSRLSLEREMGLASCRVCQCVESDKRGDAALEFLGITPIIERKDEVKSESKVEVKSDSKGEVKSDGKEIPKDMIPSKNFESKSGMMEFVGPDGEVFVCKNDLEIGLSHEDKLIELGCCCKNDLALVHYACALKWFINHGSTICEICGHIANNIKIADFNKVVGSLKEYETLRERTVNGDLGPAQVHSNTGVDPDAVAAIRRQRLSEIALWFCPHNSNNFNNSRNVDLVSQLVSEQPLNFIVEEPDPVQNTRTKWAVECTGILLATGLLTITLAWLIAPHVAKKTAGRGLRILLGGVCALTVVIFFRFFVLTRIRYGPARYWAILFVFWFLVFGIWASRTHSAHTT* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4780 373 MobiDBLite consensus disorder prediction 75 104 - -
Mal7g4780 373 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 15 372 - -
Mal7g4780 373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 185 IPR013083 -
Mal7g4780 373 Pfam RING-variant domain 137 174 IPR011016 GO:0008270
Mal7g4780 373 MobiDBLite consensus disorder prediction 1 33 - -
Mal7g4780 373 MobiDBLite consensus disorder prediction 75 103 - -
Mal7g4780 373 ProSiteProfiles Zinc finger RING-CH-type profile. 118 181 IPR011016 GO:0008270
Mal7g4780 373 SUPERFAMILY RING/U-box 135 177 - -
Mal7g4780 373 PANTHER ZINC FINGER, RING-CH-TYPE 15 372 - -
Mal7g4780 373 SMART ringv_2 125 175 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4780 1 363 C3H Transcription Factor Family AT5G08750 59.249 9.34e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4780 - - gmx:100805323 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4780 7 116098894 116102383 Mal7g4780 7 116098894 116102383 ECH