Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4773 ATGGGTGTTCCTAAGCAGAAATGGACATCAGAAGAGGAAGCTGCACTTAAAGCTGGAGTTGCCAAGCATGGAGTGGGTAAATGGCGTACAATAATCAAGGATCCTGAATTTAACCGTGTCTTGTTTATTCGTTCAAATGTTGATCTCAAGGATAAATGGAGAAATATGACTGTGACAGCAAATGGATGGAGTTCTAGGGAGAAGTCTAAGGTACCAATCAAAAGGGTGAATCATCCGGCACCAAAACAGGATGACAACTCTATGTCTGTCACTCCTGTTACTCCCGGTGATGATGAAATTGTTGATGCTCAGCCTATTCAAGTTTCAACAGATATGCTGCAGATTACCGGTCCAGAAAGGTCTATTATAAGATTAGACAACCTTATAATGGAAGCAATATCTAGCTTGAAAGAGCTTGGTGGTTCTAATAAAACAACTATTGCTTCATTCATCGAGGACCAATACTGGCCACCGGCAGACTTCAAAAAGTTGTTGTCAGCAAAACTTAAGTATCTTACATCTAGGGGAAAACTGATCAAGGTGAAACGCAGATATAGGATTGCACCTACCCCAGCATATTCAAACAGTGGAAGACACCAACCCATGCTATTATTGGAAGGGAGGCAGAAAGCCTCTATGAAATTGGACAGGGATGAGATCAGTATCCCTACAAAGGCTGAGATTGATTTAGAAATAGCGAAGATAAGGTCCATGTCTGCACAAGAGGCAGCAGCATATGCTGCTCGAGCAGTTGCTGATGCGGAAGCCGCCATAGCAGAAGCGGAAGAGGCAGCGAAGGAGGCAGAGGCTGCAGAAGCGGATGCAGATGCAGCGGAAGCTTTTGCAGAAGCTGCAATGAAAACACTGAAGGGGAGAAACACCCCAAAGACGAAGAGAGTGAATTTCTGTGTTACCCTAAATGGGTGCTCCTAA 933 0.4416 MGVPKQKWTSEEEAALKAGVAKHGVGKWRTIIKDPEFNRVLFIRSNVDLKDKWRNMTVTANGWSSREKSKVPIKRVNHPAPKQDDNSMSVTPVTPGDDEIVDAQPIQVSTDMLQITGPERSIIRLDNLIMEAISSLKELGGSNKTTIASFIEDQYWPPADFKKLLSAKLKYLTSRGKLIKVKRRYRIAPTPAYSNSGRHQPMLLLEGRQKASMKLDRDEISIPTKAEIDLEIAKIRSMSAQEAAAYAARAVADAEAAIAEAEEAAKEAEAAEADADAAEAFAEAAMKTLKGRNTPKTKRVNFCVTLNGCS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4773 310 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Mal7g4773 310 MobiDBLite consensus disorder prediction 64 92 - -
Mal7g4773 310 SMART sant 4 59 IPR001005 -
Mal7g4773 310 CDD SANT_TRF 6 57 - -
Mal7g4773 310 Pfam linker histone H1 and H5 family 126 182 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4773 310 Gene3D - 8 83 - -
Mal7g4773 310 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Mal7g4773 310 SUPERFAMILY "Winged helix" DNA-binding domain 119 196 IPR036390 -
Mal7g4773 310 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 121 189 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4773 310 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 297 - -
Mal7g4773 310 PANTHER SINGLE MYB HISTONE 4 1 297 IPR044597 GO:0003691
Mal7g4773 310 Gene3D - 120 197 IPR036388 -
Mal7g4773 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 31 IPR017930 -
Mal7g4773 310 SUPERFAMILY Homeodomain-like 2 69 IPR009057 -
Mal7g4773 310 SMART h15plus2 119 184 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4773 310 Coils Coil 244 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4773 Mal-Chr7 116050713 116056280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4773 1 296 Single Myb Histone (SMH) Gene Family AT1G49950 60.797 1.08e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal7g4773 Linker_histone 1.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4773 K09422 - csin:114320961 354.369