Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4762 ATGATTCTTGATGAGGGGCACCTTATCAAGAACCCAAGCAGTCAGAGAACTAAACGTTTGTGCGAGATAACCAGCAATTATCGCATTATCATTAGTGGCACGCCACTGCAAAATAATCTCAAGGAATTGTGGGCACTGTTTAATCTCTGCTGCCCTGAGTTGCTTGGTGAAAAAGAAAGGTTCAAAGATAAATATGAAAAACCTATAAATCGTGGAAGTTATAAAAATGCCACGGACGGACAAAAGCGTATTTCTTTATCTACATCAAAGGAGCTAAGGGCTCATATTCAGCCTCATTTTTTGAGGCGTTTGAAGAGTGAGGTTTTCGATCAAGCAGATCTTTCTCGGAAAAGAGACATCATTGTGTGGCTTCCATTGAACGATGTTCAGCGGTGTCTTTATACAGCATTTTTTAAGGGTGCGATTGTTCTCTCGGCATTTAATAAATCACCACGGTTTGCCATTTGGATTTTGAAGAAAATATGCGATCATCCACTTCTGTTGTCAAAGCGTGCAGCTGAGGATGTACTGGACGGGATGGACTCAATGCTCAAGCCAGAGGAGGTTAATGTTGCAGAAAAATTGGTGAAGCATATAGCAGATGTTGCAAAAACATATAAGTTTAAAGATGAAAATGATGTACCATGCAAAATATCTTTCATCATGTCATTATTGGTAAGCTCTGATATCATATAG 696 0.3937 MILDEGHLIKNPSSQRTKRLCEITSNYRIIISGTPLQNNLKELWALFNLCCPELLGEKERFKDKYEKPINRGSYKNATDGQKRISLSTSKELRAHIQPHFLRRLKSEVFDQADLSRKRDIIVWLPLNDVQRCLYTAFFKGAIVLSAFNKSPRFAIWILKKICDHPLLLSKRAAEDVLDGMDSMLKPEEVNVAEKLVKHIADVAKTYKFKDENDVPCKISFIMSLLVSSDII* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4762 231 Gene3D - 127 214 - -
Mal7g4762 231 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 53 IPR014001 -
Mal7g4762 231 PANTHER SNF2/RAD54 FAMILY MEMBER 1 226 - -
Mal7g4762 231 Gene3D - 1 102 IPR038718 -
Mal7g4762 231 Pfam SNF2-related domain 1 142 IPR000330 GO:0005524|GO:0140658
Mal7g4762 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4762 Mal-Chr7 115909357 115912015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4762 1 218 RAD5 or RAD16-like Gene Family AT5G43530 26.230 1.31e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mal7g4762 SNF2_N 9.6e-27 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4762 K20093 - gmx:100779283 316.235