Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4760 ATGGCGAACAAGAGCGTCAAAAAACCCCAAAGCCTCAACGATAGTCACTATCGCTTCCTTCAAGATCTCTCTGCTCCTCCCAAACCCTCTTCCAAATCCATCGATAACGATGAATTCGATACTCCGATTCAACCTCGAAATCTCATGTATCAAGACGATGATGGTGATGATACTATTCCTCAGTTTTCTGCTATCACTGACTTCGATTCTCCAATCGGTCAAAATTCTCCGGAGAAGGAAGCTCCTCTTCCTAAGGTTCCACAGTTTTTCGACGATTCTTCTCTCTGTAAAAAAAAATCTCCGGAGAATTGCCAACAGCTTAATGTAGAACACTCTCCTCTTCCTGATGAGGTTCCACAGGGTTTGGATGATTGTTCTCATAGTCAAAATTATGTGGAGAATCCCCAACCAGTTGAGGTAGAAGAAGTTCCACTTCCAATTGATGAGGTTCCTCAGGGTTTGGATAATTGTTCTCGTAGCCAAAACTATTCAGAGAATCGCCAACCAGTTAAGGTACAAGAAGCTCTTGTTCCAAAGGAGGTTCCACAGACTTTGGATGATGATCGTTCTCTTAAAGAGGAAAAGAAGACTAAGGTTAAGGTGCAAGGGCGGCGCCGTCTTTGCAAGGCTGCGGATAAAGAGGCGAGCAAAAGTGTGGCAGTTGATGAGCCTAAGTTTGATGATGATCTTGTGGATTTTGATTCGCCAATTCCGGTGCGTAAAAATTTGATTGAGATTGAGGAGAGTAGGGGTAGGTGTGATATTAGGGATATTTTGAATGAGCTTAGCTCCAAGTTTGATGAGCTATCGGTTGAGAAGAAGCCGAAGACGGTGACAAAGCCGAAGACAGTGACAAAGCTGAAGACGGTGACAAAGCCTGTTGAGCGTTTCACGGGAGGGAAAGAAATTGTTGAAGATGAGGGTTTGGAGTTTGGGAGTGCTGGATCTTCATTTTCTCCGAAACAAGAGCCCCGTGACATCTCATCAAAGGATACTAAGAATGATAGTGGTGGTCTTGGGTATGAATCAGATGATTCGGTTCAGGTGTTGGATCACTTTGAGCCTGAGAATGATGGTTCTATAACGTTGAATGACCCACGATCTACATATAAGTTGCAGCCTAAGATTGCGAAAATGCTGTATCCACATCAGCGGGAAGGATTGAAGTGGCTCTGGTCGTTGCATGTTCGGGGTAAAGGTGGTATATTGGGAGATGACATGGGTTTGGGAAAAACAATGCAGATTTGTGGCTTTATAGCTGGACTGTTTCATTCCCGTTTAATTAGAAGGGTATTGGTTGTGGCCCCCAAAACACTAATGCCACATTGGATCAAAGAGTTATCAGTTGTTGGTCTATCTGAGAAGACGAAAGAATATTATGGAGCTTGCGCAAAAGCCAGAGAATATGAACTTCAGTACATACTTCAGGACAAAGGTGTTCTTCTCACCACATATGATATTGTCCGCAACAATACCAAGTCCTTAAAGGGGCATAGATATTTTGATGATGAGGATGATGAAGATGGCCCTACATGGGACTACATGATACTTGATGAGGGGCACCTTATAAAGAACCCAAGCACTCAGAGAGCTAAAAGTTTGCTTGAGATACCCAGCGCTCATCGCATTATCATTAGTGGCACGCCACTGCAAAATAACCTCAAGGAATTGTGGGCATTGTTCAATTTCTGCTGCCCTGAATTGCTTGGTGACAAAAAATGGTTCAAAGATAAATATGAAACACCTATACTTAAAGGAAATGATAAAAATGCTTCTGACAGAGAGAAACGTATTGGTTCATCTATAGCAAAGGAGCTAAGGGATCATATTCAGCCTTACTTTTTGAGACGTTTGAAGAGTGAAGTTTTCAATCAAGATACAGAAAAAACAACTGCAAAACTTTCTCAGAAACAAGAAATCATTGTGTGGCTTCGATTGACCAATGTTCAGCGGCATCTTTATGAAGCATTTTTGAAGAGTGAGATTGTTCTCTCAGCGTTTGACGGTTCACCACTGGCTGCCCTTACGATTTTGAAGAAAATATGTGACCATCCACTTCTGTTGACAAAGCGGGCTGCTGAGGATGTATTGGATGGGATGGAATCAATGCTAAAGCCAAATGAGGTTAATGTTGCGGAAAAATTAGCGATGCATATAGCAGATGTTGCAGAAACAGATAAGTTTGAAGATGAGCATGATGTATCATGCAAAATATCTTTCATCATGTCATTATTGGATAATTTGATCCCTGAAGGGCATAGGGTGCTTATCTTTTCTCAGACTCGCAAGATGCTTAATCTAATTCAGGAATGCATAACATCCCAAGGTTATGACTTTTTACGAATTGATGGCACAACAAAATCCTGTGACAGAATAAAAATTGTTGATGATTTCCAAGATGGTGTTGGAGCTCCAATATTTCTGTTGACATCTCAGGTTGGTGGTCTAGGACTGACACTTACAAGAGCAGATCGTGTGATTGTTGTTGATCCTGCTTGGAACCCAAGTACTGATAATCAAAGTGTTGATCGAGCATATCGTATTGGTCAAAAGAAAGATGTTATTGTCTATAGACTGATGACATGCGGAACTGTTGAAGAAAAGATCTACAGGAAGCAGGTATATAAAGGAGGATTATTCAAAACAGTTTCTGAAAAGAAAGAACAAACTCGGTACTTTACCCAGAAGGATCTTAAGGAGCTTTTAAGCCTCCCAGAAGAAGGATTTGACGTGTCTGTTACCCAACGACAATTGGATCAGGCACATGATTGTCAACATATAGTGGATGCCTCTTTCCACGCACATATAGAGTTCCTGAAAAGTCAAGGCATAGCAGGAATTAGTCACCATAGTTTACTGTTTTCCAAGACAGAGCCAGTTCGAGAGGCTCCTGAGTATGAAGTAGCAAATAACCACTGGAATCCTAATCCTAATGCTAAATATATTGGAACTTCATCATCATCTTCACATGAGCAAATTGTTGATGGAGTTGCGTTTGCTTTTAATCCAAAGGATGTTAATTTACGCAAGAAAGAATCTTCTCCAAGCAGTGTTGGTAAATTGACTGAGTTAGAAATCAAGGATAGAATTGATCGGTTCTCCGTATTGCTCTCCAATACGGTGATGATTTCTAAATTACCTGACAAAGGAGAGAAACTAAAGAAACAGATTGCTGAGCTGAATCGAGCACTAACTAAACTGAAGATGGAAGAAACAAACATAGTTGACTTGGATGATATTACTGGTGAATTTGAAAGGGTGTTGAATGTATAG 3273 0.41 MANKSVKKPQSLNDSHYRFLQDLSAPPKPSSKSIDNDEFDTPIQPRNLMYQDDDGDDTIPQFSAITDFDSPIGQNSPEKEAPLPKVPQFFDDSSLCKKKSPENCQQLNVEHSPLPDEVPQGLDDCSHSQNYVENPQPVEVEEVPLPIDEVPQGLDNCSRSQNYSENRQPVKVQEALVPKEVPQTLDDDRSLKEEKKTKVKVQGRRRLCKAADKEASKSVAVDEPKFDDDLVDFDSPIPVRKNLIEIEESRGRCDIRDILNELSSKFDELSVEKKPKTVTKPKTVTKLKTVTKPVERFTGGKEIVEDEGLEFGSAGSSFSPKQEPRDISSKDTKNDSGGLGYESDDSVQVLDHFEPENDGSITLNDPRSTYKLQPKIAKMLYPHQREGLKWLWSLHVRGKGGILGDDMGLGKTMQICGFIAGLFHSRLIRRVLVVAPKTLMPHWIKELSVVGLSEKTKEYYGACAKAREYELQYILQDKGVLLTTYDIVRNNTKSLKGHRYFDDEDDEDGPTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPLQNNLKELWALFNFCCPELLGDKKWFKDKYETPILKGNDKNASDREKRIGSSIAKELRDHIQPYFLRRLKSEVFNQDTEKTTAKLSQKQEIIVWLRLTNVQRHLYEAFLKSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGMESMLKPNEVNVAEKLAMHIADVAETDKFEDEHDVSCKISFIMSLLDNLIPEGHRVLIFSQTRKMLNLIQECITSQGYDFLRIDGTTKSCDRIKIVDDFQDGVGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTCGTVEEKIYRKQVYKGGLFKTVSEKKEQTRYFTQKDLKELLSLPEEGFDVSVTQRQLDQAHDCQHIVDASFHAHIEFLKSQGIAGISHHSLLFSKTEPVREAPEYEVANNHWNPNPNAKYIGTSSSSSHEQIVDGVAFAFNPKDVNLRKKESSPSSVGKLTELEIKDRIDRFSVLLSNTVMISKLPDKGEKLKKQIAELNRALTKLKMEETNIVDLDDITGEFERVLNV* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4760 1090 MobiDBLite consensus disorder prediction 1 94 - -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 181 197 - -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 154 169 - -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 109 131 - -
Mal7g4760 1090 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 740 899 IPR001650 -
Mal7g4760 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 909 IPR027417 -
Mal7g4760 1090 SMART ultradead3 375 575 IPR014001 -
Mal7g4760 1090 Pfam Helicase conserved C-terminal domain 737 849 IPR001650 -
Mal7g4760 1090 SMART helicmild6 766 849 IPR001650 -
Mal7g4760 1090 Pfam SNF2-related domain 397 687 IPR000330 GO:0005524|GO:0140658
Mal7g4760 1090 Gene3D - 355 616 IPR038718 -
Mal7g4760 1090 Gene3D - 636 935 IPR027417 -
Mal7g4760 1090 PANTHER SNF2/RAD54 FAMILY MEMBER 367 960 - -
Mal7g4760 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 617 IPR027417 -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 1 18 - -
Mal7g4760 1090 CDD SF2_C_SNF 731 860 - -
Mal7g4760 1090 CDD DEXHc_ERCC6L 380 617 - -
Mal7g4760 1090 Coils Coil 1050 1073 - -
Mal7g4760 1090 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 392 567 IPR014001 -
Mal7g4760 1090 PANTHER OS04G0692700 PROTEIN 367 960 - -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 309 343 - -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 26 40 - -
Mal7g4760 1090 MobiDBLite consensus disorder prediction 152 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4760 Mal-Chr7 115891114 115902556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4760 380 903 RAD5 or RAD16-like Gene Family AT1G02670 23.448 4.57e-35 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mal7g4760 SNF2_N 1.4e-48 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4760 K20093 - gmx:100779283 1440.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4760 7 115891114 115902556 Mal7g4760 7 115891114 115902556 ECH