Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4754 ATGGATGATGAGAGTCATAGTAATTTGCCAAATGGATTCAACACAGAAAACCCTGAAAATCATTGTTTAAAAACAATCAACAACAACAACAATAATCATAATCATCATCACAATAGCAATAAAGAACAAGACCGTTTTCTCCCTATAGCAAATGTTGGTAGAATAATGAAAAAAGTGATTCCAGCAAATGGAAAAATCTCAAAGGATGCAAAAGAGACAGTTCAAGAATGTGTGTCGGAGTTCATAAGTTTTGTCACAGGAGAAGCATCAGATAAATGTCAAAGAGAAAAAAGAAAGACAATCAATGGTGATGATATCATTTGGGCTATTACAACATTAGGCTTTGAAGATTATGTGGAACCATTAAAATCTTACCTTCAAAAATATAGAGATATTGAAGGTGAGAAAGTTAATGTTCCAAAACAACAAAGATCTGAACAAAGGCTACATCAACATCAACAACATAATCAAGATGAATTAAATAATCAACATTTCAACAATAGTGTATATACATCTACAAATCTCATGTCTCAACCTCCTTATTTGACTACTGATCAACCATTTCCATTACCTTTCTCTCCAAATTCGATTCAAAAACAATTACGGCCGCAAGATCAGATTGATTCAATAGGGCATTGGTATGAATGA 648 0.3256 MDDESHSNLPNGFNTENPENHCLKTINNNNNNHNHHHNSNKEQDRFLPIANVGRIMKKVIPANGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVEPLKSYLQKYRDIEGEKVNVPKQQRSEQRLHQHQQHNQDELNNQHFNNSVYTSTNLMSQPPYLTTDQPFPLPFSPNSIQKQLRPQDQIDSIGHWYE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4754 215 SUPERFAMILY Histone-fold 43 165 IPR009072 GO:0046982
Mal7g4754 215 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Mal7g4754 215 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Mal7g4754 215 PRINTS CCAAT-binding transcription factor subunit A signature 112 130 - -
Mal7g4754 215 MobiDBLite consensus disorder prediction 1 41 - -
Mal7g4754 215 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 46 110 IPR003958 -
Mal7g4754 215 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 1 204 - -
Mal7g4754 215 Gene3D Histone, subunit A 33 169 IPR009072 GO:0046982
Mal7g4754 215 MobiDBLite consensus disorder prediction 170 205 - -
Mal7g4754 215 MobiDBLite consensus disorder prediction 7 34 - -
Mal7g4754 215 ProSitePatterns NF-YB/HAP3 subunit signature. 77 93 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mal7g4754 215 MobiDBLite consensus disorder prediction 170 215 - -
Mal7g4754 215 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 204 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4754 Mal-Chr7 115843731 115844378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4754 41 213 CCAAT-HAP3 Transcription Factor Family AT2G13570 67.935 6.41e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal7g4754 CBFD_NFYB_HMF 3.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4754 K08065 - gmx:100778216 342.813