Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4728 ATGGAAAATAACCAAAGTAATACTAGTAGTGCATTCACAAGCACTAATTGGAATCTTGAAAAAATGGAAACAAATGAACAAATCCGTATTATTCTCCAACAAGATCATCATCAAGTTTCTATGAATTCTTCTGGAATTTGGCCACCAAATAACTACAACAACATGATCATGGCACCACCACCACCACCACCACCATCTTCATCAGGTTCACTCAATGACATATTAGGGATCCACCGAATCGAAGACTTCGAAGAACAAGAAGAAGAGTTGGGAGCTATGAAGGAAATGATGTACAAGATTGCAGCTATGCAACCGGTGGACATCGACCCCGCAACTATTCGAAAACCAAAGCGAAGAAACGTTCGAATCAGCGAAGATCCACAAAGTGTTGCAGCTAGACATAGAAGAGAAAGAATCAGTGAGAAGATTCGTATCCTTCAAAGACTAGTTCCTGGTGGAACTAAAATGGATACAGCTTCTATGCTTGATGAAGCCATTCGATATGTTAAGTTTTTGAAGAGACAAATTAGGTTGCTTCAATCCACTCCTCAAAATCAACAATTACCACTTCCATCACAATGCATTAATTCTACTCCTCCTAGTGCTTTGTTATTGTCCCCTACTTCCGGTTCTGACGTCTGGCCTTTCGCACCAAATTTATTAGCCACTTCCACAACCGCCGCCTCCATCGACTTATCTGCCGGAGTTCATTTTGACGCCGGAGGACATTCACATTCACATGTCCATGCTTGTGATGGCTCATCAAGCTTTAATCATCATGAGGTAATTAGTGAGTGA 798 0.4123 MENNQSNTSSAFTSTNWNLEKMETNEQIRIILQQDHHQVSMNSSGIWPPNNYNNMIMAPPPPPPPSSSGSLNDILGIHRIEDFEEQEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSTPQNQQLPLPSQCINSTPPSALLLSPTSGSDVWPFAPNLLATSTTAASIDLSAGVHFDAGGHSHSHVHACDGSSSFNHHEVISE* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4728 265 Pfam Helix-loop-helix DNA-binding domain 133 172 IPR011598 GO:0046983
Mal7g4728 265 SMART finulus 129 178 IPR011598 GO:0046983
Mal7g4728 265 Gene3D - 126 192 IPR036638 GO:0046983
Mal7g4728 265 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 11 247 IPR045843 GO:0003700|GO:0006355
Mal7g4728 265 CDD bHLH_AtIND_like 124 181 - -
Mal7g4728 265 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 11 247 - -
Mal7g4728 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Mal7g4728 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 186 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4728 Mal-Chr7 115591114 115591911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4728 92 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 82.022 5.15e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal7g4728 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4728 - - aprc:113856609 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4728 7 115591114 115591911 Mal7g4728 7 115591114 115591911 ECH