Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4727 ATGAGTGGAAGTAGCAGAAAGCTATCTTCAAACAGGGATTCAAGAGATGAACCTGAATTTGCACCCGAGAGTGTTACTAATAGCAATAGTTCAAGGTATTTGGAAAAAAATGATATGCTAAAACCCAGAATGGGGTTTTCACGCAAGGAGACTTTTTCGGGAGGCAGAGGTTCAAATAAGGATGACGAAGACTACCAAGTTTTTGATGCAACAATTGCACAAGACACTGATGGAAGATACAATATGAAAACGTCTCCAAGGTTTGAGGAATGGAAAAATAGGGAGCATAGTCAATCTGCAAAAGCTGATTACAGCAGGTCTAGGAGCCGGAGTTGGAGCCGGAGTTGGAGCCCTCCTCGTGGTTTTAGGTATTCAGCTGTGGATGATAGGAACAGAACGAGGGATGGCAGATTAGCACAACCTTGTAGAGAATTTGCTGTTGGGAACTGCAGAAGAGGCAGCCATTGTCATTTCCTTCACCATTATAAGCAAAGTTATGAGGATAGCAGGGAAAGTAGACACAGGCAAGATGGACCCAGATATTCTAATCCCCGTGAGAGTGGGGATTATTCTCTTACAAATCAAAGATCTAATGAAGCTTGCATTTATTTTGCAAAGGGAAGGTGTAGAATGGGAGAATCATGCAAGTATGTGCATCATGACAATTCTGATGGGTTTGATAAAATTTCGGCAGATGAATCATCTAGGGAAAGGGAAATTGATAGAAGACGCATAGAGCATTCATTCAAGCTGGGTGGCCAGCATCATCCAAACCACAGTAGTAATATTCCTTGCAAATTTTTTGCTTTTGGGAATTGTCGGAATGGTCAAGATTGTAGGTTTTCTCATGACAGACAAGCATTTTCTAGCCCTAGATTAAGGGATGATATGTCAAGGAGTAATCAAGGTGATGATCAGGTGTTGGATAGACCAAAATTGAGCGATTCAGTTACTCCTAATGGAAGGCTAAGAGATGATAGATGGGGTTCAGATGCCAGTATGGCTGATGTAGATAAAGTTTGGGACGGTCCAATGCAGAATGATTTAGTTGCCGTCTCCAATACAGCAAATCTGGTTGAGGACAACAAAAATGGAATCATAGGCGCCCCAGAACCTGGATTCATGGCTTGGCCAATGAATAATGGATTGGACCATAGCTTAGACAGGAACAGAAAGCATAATGAATCACCATTTTCAATTGATAAGAAGGAAGCCAACTGTAGGACGGCAGAAAATGCATTTGACAACATTCTCATTTCCCAGTCAGTAGGTGGAGGCATTTGGCCTGGTGATGAACAAATGTCTCCTGATTGGAATTATGGTGCGAGATCTTCCAGCCATATTAAAGATGAGCATGTGCAGAATAAGCAACAAGTTGCTCCAGGACAAGGATTAAATCAGAATGCTCAGAATATAACTGCTTCCCATTTGGTTGGACAGAGTCAAGCAACAGTTTCCATTGTTCCTCCAAGAGCAAGAATTATTGAAAGTATACAGAACCAGAAACTTTCCACTGAGAAAAACTACACTGTAGACTCAAATATTATGAATGCAAGCCTATCACAAATCGGTTCAGGACATACTTCAACTCAGAATGTAGTCAGCAAAGAACAGCTTGCTCAACTTAGCTGCCTTTCAGCCTCTCTTGCACACATCCTTGGAACTGATCAGCAGCTCCCACAAGTTCATTCTACTCTAAAGCCTTGTAATGCAAAGGCCACTCTCTTCGTAAGCAAAATTGAAGAGTCTGCTAATCCTGTTTCTATGACATTCGTCAAGCCAGATCCTGCTACTGGATTGAAGCAGTATGATCCAATGTTTGATAGTATAGAGCCCAAGAATATTAATGTAAGTGGGGTCCCTCCAACCTTTTCTCCTAGTATAAAGACTCCGAAAAATGCAGTGGAAATTCCACCACTATTATCTAACCTGGGACAAAACTTTGATGATTCTCTTAAAAAGGAGACCAACAAAATGGTAGCTGAAGAAAAGCCAATTTCTCAATCTGAAAATAAACCTACAGAAGAGAATAGTCCTATGGGAAACATGGACCAAAATGATGGACCTGACGAGGCCAAGAAAACAAAGGACGCGAAGGGGAGTCGTGCATTTAAATTTTCATTGGTAGAGCTTATTAAGGAGATTCTGAAACCAACATGGAAAGATGGTAAAATCACCAAAGAAGATTATAAAACAATTGTGAAGAAGGTTACTGATAAAGTAACTGGTACAGTACAGCGGGTACATATTCCTCAGACACAAGAGAAAATTGAACGCTATTTATCAGTTTCGAAACCAAAGGTTAACAAACTTATACAGGCGTATGTGGAAAAGGTTCAGAAGGCTTAG 2349 0.4087 MSGSSRKLSSNRDSRDEPEFAPESVTNSNSSRYLEKNDMLKPRMGFSRKETFSGGRGSNKDDEDYQVFDATIAQDTDGRYNMKTSPRFEEWKNREHSQSAKADYSRSRSRSWSRSWSPPRGFRYSAVDDRNRTRDGRLAQPCREFAVGNCRRGSHCHFLHHYKQSYEDSRESRHRQDGPRYSNPRESGDYSLTNQRSNEACIYFAKGRCRMGESCKYVHHDNSDGFDKISADESSREREIDRRRIEHSFKLGGQHHPNHSSNIPCKFFAFGNCRNGQDCRFSHDRQAFSSPRLRDDMSRSNQGDDQVLDRPKLSDSVTPNGRLRDDRWGSDASMADVDKVWDGPMQNDLVAVSNTANLVEDNKNGIIGAPEPGFMAWPMNNGLDHSLDRNRKHNESPFSIDKKEANCRTAENAFDNILISQSVGGGIWPGDEQMSPDWNYGARSSSHIKDEHVQNKQQVAPGQGLNQNAQNITASHLVGQSQATVSIVPPRARIIESIQNQKLSTEKNYTVDSNIMNASLSQIGSGHTSTQNVVSKEQLAQLSCLSASLAHILGTDQQLPQVHSTLKPCNAKATLFVSKIEESANPVSMTFVKPDPATGLKQYDPMFDSIEPKNINVSGVPPTFSPSIKTPKNAVEIPPLLSNLGQNFDDSLKKETNKMVAEEKPISQSENKPTEENSPMGNMDQNDGPDEAKKTKDAKGSRAFKFSLVELIKEILKPTWKDGKITKEDYKTIVKKVTDKVTGTVQRVHIPQTQEKIERYLSVSKPKVNKLIQAYVEKVQKA* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4727 782 MobiDBLite consensus disorder prediction 1 67 - -
Mal7g4727 782 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 780 - -
Mal7g4727 782 MobiDBLite consensus disorder prediction 290 329 - -
Mal7g4727 782 MobiDBLite consensus disorder prediction 21 35 - -
Mal7g4727 782 Pfam Torus domain 171 220 IPR032297 -
Mal7g4727 782 SUPERFAMILY CCCH zinc finger 195 220 IPR036855 GO:0046872
Mal7g4727 782 MobiDBLite consensus disorder prediction 167 190 - -
Mal7g4727 782 MobiDBLite consensus disorder prediction 104 118 - -
Mal7g4727 782 ProSiteProfiles Zinc finger C3H1-type profile. 260 286 IPR000571 GO:0046872
Mal7g4727 782 SMART c3hfinal6 260 285 IPR000571 GO:0046872
Mal7g4727 782 SMART c3hfinal6 196 221 IPR000571 GO:0046872
Mal7g4727 782 SMART c3hfinal6 136 162 IPR000571 GO:0046872
Mal7g4727 782 MobiDBLite consensus disorder prediction 290 311 - -
Mal7g4727 782 MobiDBLite consensus disorder prediction 659 699 - -
Mal7g4727 782 PANTHER ZINC FINGER CCCH DOMAIN PROTEIN-RELATED 1 780 - -
Mal7g4727 782 MobiDBLite consensus disorder prediction 90 118 - -
Mal7g4727 782 ProSiteProfiles Zinc finger C3H1-type profile. 195 222 IPR000571 GO:0046872
Mal7g4727 782 ProSiteProfiles Zinc finger C3H1-type profile. 136 163 IPR000571 GO:0046872
Mal7g4727 782 Gene3D - 133 234 - -
Mal7g4727 782 SUPERFAMILY CCCH zinc finger 262 284 IPR036855 GO:0046872
Mal7g4727 782 Pfam RNA-binding, Nab2-type zinc finger 141 160 - -
Mal7g4727 782 Pfam RNA-binding, Nab2-type zinc finger 264 283 - -
Mal7g4727 782 Gene3D - 239 295 - -
Mal7g4727 782 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4727 Mal-Chr7 115569574 115574198 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal7g4727 Torus 8.7e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4727 - K22909 gmx:100783856 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4727 7 115569574 115574198 Mal7g4727 7 115569574 115574198 ECH
Mal2g1522 2 18241091 18246042 Mal7g4727 7 115569574 115574198 ECH