Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4712 ATGGCCCTTTTCAACGAGATAGAGTCACTTCCCAACGAATTCCCAGAGGATTTAAAAGTTCTTATAGTTGATCATGACACTGATGTTCTTGATGCTATTGTGGAAATGTGTATTCCATGCAATTATCATGTTTCCACATGCTCTAAGGCTGCTTTTGCTTTGAAACTTTTGACGGAAACAAAGGGCTTTGTTGATGTGATACTAATTGAAGCTCAAATGCCAGACATGGATTCATACGATTTTGTCCGACATGTTACCCAACAAATCAATATTCCCGTCATTATGATGTGTGTTGATGAATCAAGAAGTGCAGTGATGAAAGCTATGGCAAACGGGGCTTGCCAATATTGGATTAAGCCTTTAATTGAGAATCAAATCAAGAACTTGTGGCAATATGCTGCAAAGAAAGTTTTGAAGAATGAAAATAAACATGATCAAATTCTTGGAATCTTGAAGGTAAATGGTCAAAGCAAAAGGGGAAGAGATGATAATGCACCTAAAGAAACAAATGATTGCCTTGTTGAAAAGGATAATAATGATAATGATAATTATCAGCCCCTAACAAAGAAGAATCGTTTATCATGGTCATCTGAATTGCACCAACAATTTCTAAGGGTTGTGAATGAACTTGGCCTTGATAACGCAAAGCCTAAAGCAATTCTTAAAGAGATGAATGTTCCTGGTTTGACAAATCAGCAAGTTGCTAGCCATTTGCAGAGAGTGAAAATTCATTTGAAGAGTTCAACGCAAGAGACACTTCTAAAGACTAGAATGTCAAAAGATGGGCAGAAAAAATCAAATTTTGATCAATATCATGTTTCTAACGAAACACAATTGAGCACTGAAGTTGTTCACTCAATACAAGACCAGAAAGTTGTAATGAACTCAGCCATACAATGCAACAACAACTCTCATGCACAACAACATATGATGGCATTTGACGATTATGAAGTTTTTGACAATATTGGCAACTTTTTTACTGACGAGTCGAACATGATCCTAGACGATATTGACAACATTTTTACTGATGAGTCGGACATGATCCTACACGATATTGCCAACCTTTTTTCTGACCAGTCGAACATGATTCTAGATGATTCATCATTACTATACGAAGCACGACCTCCATTGCAATATGGTATATTCAATTAG 1152 0.3637 MALFNEIESLPNEFPEDLKVLIVDHDTDVLDAIVEMCIPCNYHVSTCSKAAFALKLLTETKGFVDVILIEAQMPDMDSYDFVRHVTQQINIPVIMMCVDESRSAVMKAMANGACQYWIKPLIENQIKNLWQYAAKKVLKNENKHDQILGILKVNGQSKRGRDDNAPKETNDCLVEKDNNDNDNYQPLTKKNRLSWSSELHQQFLRVVNELGLDNAKPKAILKEMNVPGLTNQQVASHLQRVKIHLKSSTQETLLKTRMSKDGQKKSNFDQYHVSNETQLSTEVVHSIQDQKVVMNSAIQCNNNSHAQQHMMAFDDYEVFDNIGNFFTDESNMILDDIDNIFTDESDMILHDIANLFSDQSNMILDDSSLLYEARPPLQYGIFN* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4712 383 SUPERFAMILY CheY-like 16 137 IPR011006 -
Mal7g4712 383 SUPERFAMILY Homeodomain-like 188 247 IPR009057 -
Mal7g4712 383 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 309 IPR045279 GO:0009736
Mal7g4712 383 SMART REC_2 18 130 IPR001789 GO:0000160
Mal7g4712 383 CDD REC_typeB_ARR-like 20 134 - -
Mal7g4712 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 246 IPR017930 -
Mal7g4712 383 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Mal7g4712 383 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Mal7g4712 383 Gene3D - 12 144 - -
Mal7g4712 383 Gene3D - 187 247 - -
Mal7g4712 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Mal7g4712 383 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 12 309 - -
Mal7g4712 383 Pfam Myb-like DNA-binding domain 193 241 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4712 Mal-Chr7 115327982 115329907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4712 14 228 Response Regulator Gene Family AT4G16110 37.021 7.20e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal7g4712 Response_reg 9e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4712 - K14491 mtr:MTR_8g093040 338.961