Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4709 ATGTATGCTTCTACTTCCTTTACTTTACCACTACTCCATGAACTTCTTGTGGAATCTCACACAAGAAGGTTACTCTTCCAAAATCCAATTGTTCATCAATCACTTAAAATCAACTCCCCTGTATTCACAAACAACCACAAATCAACAAACTCAAATTTTGGAGCTCGTGAATTTGATTCAAATGCTGTGATGATAACTGCAGTCCTATTATGTGCTTTTATTTGTTCCCTTGCATTGAACTCCATCATAAGGTGTGCCTTAAGGATTTCAAACGTAACCATCAACAACAACGAATCTTCTTCGAGTTCAAGCAACAATAATTCACCTCGATTGGTTAACAAAGGAATCAAGAAGAATGCACTCAAGAAATTTCCTATAGTGACTTACTCCGGAGAGTTGAATCTATCAAGTTTGGATACAGAGTGTATGATATGCCTCTCAGAGTTCAAAAATGGCGAAAAGGTACGCATTTTGCCTAAATGCAACCATGGTTTCCATGTTGGTTGCATTGACAAATGGCTAAAAGAACACTCATCATGTCCAAAGTGTAGACAATGTCTTCTTGAAACATGTCGGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCTGTGCCAGAAACTATTATAACGATCCAACCACTAGAGCACGAAGCTTTGGAACGTAACTATAGAGAAATATAA 687 0.3828 MYASTSFTLPLLHELLVESHTRRLLFQNPIVHQSLKINSPVFTNNHKSTNSNFGAREFDSNAVMITAVLLCAFICSLALNSIIRCALRISNVTINNNESSSSSSNNNSPRLVNKGIKKNALKKFPIVTYSGELNLSSLDTECMICLSEFKNGEKVRILPKCNHGFHVGCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETIITIQPLEHEALERNYREI* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4709 228 SUPERFAMILY RING/U-box 120 189 - -
Mal7g4709 228 PANTHER RING-H2 FINGER PROTEIN ATL78 1 228 IPR044602 GO:0016567|GO:0016740
Mal7g4709 228 Pfam Ring finger domain 141 184 IPR001841 -
Mal7g4709 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 98 188 IPR013083 -
Mal7g4709 228 SMART ring_2 142 183 IPR001841 -
Mal7g4709 228 CDD RING-H2_PA-TM-RING 141 184 - -
Mal7g4709 228 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Mal7g4709 228 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4709 Mal-Chr7 115288053 115288739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4709 58 188 C3H Transcription Factor Family AT3G10910 55.224 4.28e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4709 K19040 - gmx:100780127 291.967