Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4708 ATGTATACTTCTACTTCCTTTACTTCACCACTCCTCCATGAGCTTCTTGTGGAATCTCACACAAGAAGGTTACTCTTCCAAAGTCCATCACTTAAAATCAACTCCCCTGAATTCACAAACAACCACAATTCAACAGACTCAAATTTCGGAGCTCGTGAATTTGATTCAGATGTTGTGATGATAATTGCAGTCCTATTATGTGGTTTTATTTGCTCACTTGTTTTAAACTCCATCATAAGGTGTGCCTTAAGAGTTTCCAATGTAGCGATCAACAACGAATCTTCTAGTAACAACTCTTCACCTCAATTGGCCAACAAAGGAATCAAGAAGAAAGTTCTCAAGAGATTCCCAAAAGTTAGTTATTCAGCTGAGTTGAAACTACCAGGTTTGGATACAGAGTGTATGATATGTCTCTCAGAGTTCAAAAATGGCGAAAAGGTACGCATTTTGCCAAAATGCAACCATGGTTTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCCAAGTGTAGACAATGTCTTCTTGAAACTTGTCCAAAGGTTGGTGGATCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACCATTATAATGATCCAAACATTAGAGCCTGAAGCTTTGGAACGAAACTATAGGGACATATAA 663 0.3906 MYTSTSFTSPLLHELLVESHTRRLLFQSPSLKINSPEFTNNHNSTDSNFGAREFDSDVVMIIAVLLCGFICSLVLNSIIRCALRVSNVAINNESSSNNSSPQLANKGIKKKVLKRFPKVSYSAELKLPGLDTECMICLSEFKNGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCPKVGGSQVQPIVLPVPETIIMIQTLEPEALERNYRDI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4708 220 PANTHER RING-H2 FINGER PROTEIN ATL78 1 220 IPR044602 GO:0016567|GO:0016740
Mal7g4708 220 SUPERFAMILY RING/U-box 112 182 - -
Mal7g4708 220 Pfam Ring finger domain 133 176 IPR001841 -
Mal7g4708 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 180 IPR013083 -
Mal7g4708 220 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Mal7g4708 220 SMART ring_2 134 175 IPR001841 -
Mal7g4708 220 CDD RING-H2_PA-TM-RING 133 176 - -
Mal7g4708 220 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4708 Mal-Chr7 115282748 115283410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4708 54 180 C3H Transcription Factor Family AT3G10910 51.128 1.49e-41 137