Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4707 ATGTATGCTTCTACTTCCTTTACTTTACCACTACTCCATGAACTTCTTGTGGAATCTCACACAAGAAGGTTACTCTTCCAAAACCCGGTTGATCATCAATCACTTAAAACCAACTATCATGTTTCCGCGAACAACCGTAATTCAACCGACTCATATTTCGGAGTTCGTGAATTTGATTCAAAAGTTGTGATGATACTTGCAGTCATATTATGTGCTTTTATTTGCTCACTTGCATTAAATTTCATCATAAGGTGTGCCTTAAGGCTTTCAAACGTAACCATCAACAACGACTCTTCTTCTAGTTCGAGCATAAACCCTTCGCCTCAATTGGTGAACAAAGGAATCAAGAAGAATGCTCTCAAGAAATTTCCTACAGTGTGTTACTCCAAAGAGTTGAATCTACCAAGTTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAGGTACGCATTTTACCTAAATGCAACCATGGTTTTCATGTTCGTTGCATTGACAAATGGTTGAAAGAACACTCATCATGTCCCAAGTGTAGACAATGCCTTCTTGAAACTTGTCAGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAATTATTATAAGGATTCAACCACTAGAACATGAAGCTTTGGAGCGTAACTATAGTGAAATATAA 684 0.3874 MYASTSFTLPLLHELLVESHTRRLLFQNPVDHQSLKTNYHVSANNRNSTDSYFGVREFDSKVVMILAVILCAFICSLALNFIIRCALRLSNVTINNDSSSSSSINPSPQLVNKGIKKNALKKFPTVCYSKELNLPSLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCQKIGGSQVQPIVLPVPEIIIRIQPLEHEALERNYSEI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4707 227 SMART ring_2 141 182 IPR001841 -
Mal7g4707 227 CDD RING-H2_PA-TM-RING 140 183 - -
Mal7g4707 227 SUPERFAMILY RING/U-box 119 189 - -
Mal7g4707 227 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 227 - -
Mal7g4707 227 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
Mal7g4707 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 187 IPR013083 -
Mal7g4707 227 Pfam Ring finger domain 140 183 IPR001841 -
Mal7g4707 227 PANTHER RING-H2 FINGER PROTEIN ATL78 1 227 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4707 Mal-Chr7 115259063 115259746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4707 58 187 C3H Transcription Factor Family AT3G10910 49.624 1.04e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4707 K19040 - gmx:100780127 298.13