Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4706 ATGTATACTTCTACTTTCTTTACTACACTTCTTCATGATCTTCTTGTGGAATCTCACACAAGAAGGTTACTCTTCCAAAATCCAATTGATCATTCACCAACCAACTCCCCTGTTCTCACACAAAACCACAATTCAACTAACTCATATTTTGGAATTCGTGAATTTGATGCAAATGTTGTGATGATACTTGCAGTCCTATTGTGTGCTCTTATTTGTTCACTTGCTTTAAACTTCATCATAAGGTGTGTCTTAAGGATTTCGAACGCAGCCGTCATCAACGACTCTTCTTTGAGTTTGAGCAGCAACACTTCACCTCAATTGGCTAACAAAGGAATCAAGAAGAAAGCTCTCAAAACATTCCCAACAGTGAGTTATTCAACTGAGTTGAAATTACCAAGTTTAGATACAGAGTGTGTGATATGTCTCTCAGAATTCACAAAAGGTGAAAAGGTGCGCATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATTGACAAATGGCTAAAAGAACACTCATCATGTCCAAAGTGTAGACAATGTCTTCTTGAAACTTGCCGGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCTGTGCCAGAAACTATTATAACGATCCAACCACTAGAGCACGAAGCTTTTGAATGTAACTATAGGGAAGAAAGCAGATAA 681 0.3877 MYTSTFFTTLLHDLLVESHTRRLLFQNPIDHSPTNSPVLTQNHNSTNSYFGIREFDANVVMILAVLLCALICSLALNFIIRCVLRISNAAVINDSSLSLSSNTSPQLANKGIKKKALKTFPTVSYSTELKLPSLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETIITIQPLEHEAFECNYREESR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4706 226 SUPERFAMILY RING/U-box 116 185 - -
Mal7g4706 226 Pfam Ring finger domain 137 180 IPR001841 -
Mal7g4706 226 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Mal7g4706 226 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 224 - -
Mal7g4706 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 184 IPR013083 -
Mal7g4706 226 PANTHER RING-H2 FINGER PROTEIN ATL78 1 224 IPR044602 GO:0016567|GO:0016740
Mal7g4706 226 SMART ring_2 138 179 IPR001841 -
Mal7g4706 226 CDD RING-H2_PA-TM-RING 137 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4706 Mal-Chr7 115255861 115256541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4706 22 184 C3H Transcription Factor Family AT3G10910 49.405 7.40e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4706 K19040 - gmx:100780127 306.219