Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4705 ATGTATGCTTCTACTTTCTTTACTTCACCACTCCTCCATGAGCTTCTTGTGGAATCTCACACAAGAAGGTTACTCTTCCAAAATCCAATTGATCATTCACCAACCAACTCCCCTGTTCTCACACAAAACCACAATTCAACTAACTCATATTTTGGAATTCGTGAATTTGATGCAAATGTTGTGATGATACTTGCAGTCCTATTGTGTGCTCTTATTTGCTCACTTGCATTAAACTCCATCATAAGGTGTGCTTTAAGGTTTTCAAACGTAGCCCTCAACAACGACTCTTCTTCGAGCAACTCTTCACCTCAATTGGCTAACAAAGGAATCAAGAAGAAAGCTCTCAAAACATTCCCAACAGTGAGTTATTCAACTGAATTGAAACTACCAGGTTTGGATACAGAGTGTGTGATATGTCTCTCAGAATTCACAAAGGGTGAAAAGGTGCGGATTTTGCCTAAATGCAACCATGGTTTCCATGTTCGTTGCATTGACAAATGGCTAAAAGCACACTCATCATGCCCCAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATTGGAAGCACCACCTACGTTGCCGGTGGCAGAAACTATTATAAGGATTCAACCACTAGACGCCGAAGCTTTTGAACGTAACTATAGATAA 660 0.4091 MYASTFFTSPLLHELLVESHTRRLLFQNPIDHSPTNSPVLTQNHNSTNSYFGIREFDANVVMILAVLLCALICSLALNSIIRCALRFSNVALNNDSSSSNSSPQLANKGIKKKALKTFPTVSYSTELKLPGLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGLEAPPTLPVAETIIRIQPLDAEAFERNYR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4705 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 182 IPR013083 -
Mal7g4705 219 PANTHER RING-H2 FINGER PROTEIN ATL78 1 219 IPR044602 GO:0016567|GO:0016740
Mal7g4705 219 SUPERFAMILY RING/U-box 114 183 - -
Mal7g4705 219 SMART ring_2 136 177 IPR001841 -
Mal7g4705 219 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 219 - -
Mal7g4705 219 Pfam Ring finger domain 135 178 IPR001841 -
Mal7g4705 219 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Mal7g4705 219 CDD RING-H2_PA-TM-RING 135 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4705 Mal-Chr7 115251132 115251791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4705 56 201 C3H Transcription Factor Family AT3G10910 50.658 1.36e-43 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4705 7 115251132 115251791 Mal2g1541 2 18445262 18445948 PCT