Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4703 ATGGGTGCTCCTAAGCAGAAATGGACAGCAGAAGAGGAAGCGGCACTCAAAGCTGGAGTTGTCAAGCATGGGGTGAGTAAATGGCGTACAATACTCAAGGATCCTGAGTTTAACCACGTCTTATATATCCGCTCAAATATCGATCTCAAGGATAAATGGAGAAATCTGAGTGTGACAGCAAATGGACGGACCTCCAGGGAGAAGTCTAAGGTAGCAATCCAAAGGGTGCATCATCAGGCACCAAAACAGGATGACAGCTCGATGGCTGTCACTCTTGTTACCCCAATTGATGAAGAAATTGTTGATGTTCAGCCTCTTCAAGTTTCAAGAGATATGCCGCAGATTCCTGGTCCGAAAAGGTTGGATAACCTTATAATGGAAGCTATATCTAGCATGAATGAGCTTGGTGGTTCTAATAAAACAACTATTGCTTCTTTCATAGAGGACCGATACCGGGCACCGGCAGAGTTAAAAAAGTTGTTGTCAGCAAAACTGGAGTATCTTACATCTAGTGGAAAACTGATCAAGGTGAAATGCAGGTATAGGATTGCTCCTACACCAGCATATGCAGACAGAGACCCACCCATGCCATTATTGGAAGGGAGGCCGAAAGCCTCTATGGAATTTGACAGGGATGAGAGTAATATCCCTACAAAGTTTGAGATAGATTTAGAATTAGCCAAGATAGTAAGGTCCATGTCTGCACAAGAGGTAGCCACATATGCTGCTCGAGCAGTTGCTGAAGCGGAAGCTGCTGTAGCAGAAGCTGAATTGGCAACAAAGGAGGCAGAGGCTGCAGAAGCGGATGCAGAAGTAGCGGCAGCTTTTGCAAAAGCTGCAATGAAAACACTGAAGGGGATAACCACCCCAAAGAAGCTTCAAGTACCAAGCAGGGACGAATTTTAG 906 0.4525 MGAPKQKWTAEEEAALKAGVVKHGVSKWRTILKDPEFNHVLYIRSNIDLKDKWRNLSVTANGRTSREKSKVAIQRVHHQAPKQDDSSMAVTLVTPIDEEIVDVQPLQVSRDMPQIPGPKRLDNLIMEAISSMNELGGSNKTTIASFIEDRYRAPAELKKLLSAKLEYLTSSGKLIKVKCRYRIAPTPAYADRDPPMPLLEGRPKASMEFDRDESNIPTKFEIDLELAKIVRSMSAQEVATYAARAVAEAEAAVAEAELATKEAEAAEADAEVAAAFAKAAMKTLKGITTPKKLQVPSRDEF* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4703 301 Gene3D - 118 192 IPR036388 -
Mal7g4703 301 SUPERFAMILY Homeodomain-like 2 65 IPR009057 -
Mal7g4703 301 Gene3D - 8 84 - -
Mal7g4703 301 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Mal7g4703 301 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Mal7g4703 301 Pfam linker histone H1 and H5 family 121 178 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4703 301 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 290 - -
Mal7g4703 301 SMART sant 4 59 IPR001005 -
Mal7g4703 301 PANTHER SINGLE MYB HISTONE 4 1 290 IPR044597 GO:0003691
Mal7g4703 301 SMART h15plus2 117 180 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4703 301 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 116 185 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4703 301 Coils Coil 244 271 - -
Mal7g4703 301 SUPERFAMILY "Winged helix" DNA-binding domain 120 192 IPR036390 -
Mal7g4703 301 CDD SANT_TRF 6 56 - -
Mal7g4703 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4703 Mal-Chr7 115212851 115217007 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4703 1 236 Single Myb Histone (SMH) Gene Family AT1G49950 54.132 1.59e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal7g4703 Linker_histone 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4703 K09422 - gmx:778173 322.398