Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4701 ATGGGTGCTCATAGGCAAAAATGGACATCAGAAGAGGAAGCGGCACTCAAAGCTGGAGTTGTCAAGCACGGGGCTGGTAAATGGAGTACAATACTCAAGGATCCTGAGTTCAACCATGTCCTATATAACCGCTCAAATATCGATCTCAAGGATAAATGGAGAAATCTTAGTGTGAAGGCAAATGGATGGACCTCCAAGGAGAAGTCTCAAGTAGCAATCGAAACGGTGCATCATCATGCACCAAAACAGGATGACAACTCAATGGCTGTCACTCTTGTTACTGACGAAATTCTTGATGTTTATCCTCTTAAAGTTTCAAAAGATACGCTCCAGATTCCTGGTCTCAAAAGGTCTATTGGAAGTTTGGATAACCTTATAATGGAAGCTATATCTAGCTTGAATGAGCTTGGTGGTTCTAATAAAACAACTATTGCTTCTTTCATAAAGGACCAATACTGCGCACCGGCAGACTTCAAAAAGGTTTTGTCAGCCAAACTGGAGTATCTGACATCTAGTGGAAAACTGATCAAGGTGAAACACAGGTACAGGATTGTGCCTATCCCAGCATATTTAGACAGAGGGATACACCCACCCAAGTTATTATTGGAAGGGAGGCAGAAAGCCTCTATGAAATTTGATAGGGATGAGAGCAATATCCCTACAAAGTCCATGTCTGCACAAGAGGTAGCCGCATACGCTGCTCGAGCAGTTGCTGAAGCGGAAGCCGCCACAGAAGAAGCTGAAGAGGCAGAAAAGGAGGCAGAGGCGGCAGAAGCGGATGCAGATTCAGCGGCAGCTATTGCAAAAGCTGCAAAAGCTGAACTAAAATCACTGAAGGGGAGAAAACCCCCAAAAACGGTAAATCTCGGCTTTTCCTTCCGCCGTAATACTATTACATAA 900 0.4422 MGAHRQKWTSEEEAALKAGVVKHGAGKWSTILKDPEFNHVLYNRSNIDLKDKWRNLSVKANGWTSKEKSQVAIETVHHHAPKQDDNSMAVTLVTDEILDVYPLKVSKDTLQIPGLKRSIGSLDNLIMEAISSLNELGGSNKTTIASFIKDQYCAPADFKKVLSAKLEYLTSSGKLIKVKHRYRIVPIPAYLDRGIHPPKLLLEGRQKASMKFDRDESNIPTKSMSAQEVAAYAARAVAEAEAATEEAEEAEKEAEAAEADADSAAAIAKAAKAELKSLKGRKPPKTVNLGFSFRRNTIT* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4701 299 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 284 - -
Mal7g4701 299 Pfam linker histone H1 and H5 family 122 179 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4701 299 PANTHER SINGLE MYB HISTONE 4 1 284 IPR044597 GO:0003691
Mal7g4701 299 MobiDBLite consensus disorder prediction 242 261 - -
Mal7g4701 299 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Mal7g4701 299 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 118 186 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4701 299 Coils Coil 233 274 - -
Mal7g4701 299 SMART h15plus2 116 181 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mal7g4701 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Mal7g4701 299 SUPERFAMILY Homeodomain-like 2 69 IPR009057 -
Mal7g4701 299 Gene3D - 116 189 IPR036388 -
Mal7g4701 299 SUPERFAMILY "Winged helix" DNA-binding domain 117 186 IPR036390 -
Mal7g4701 299 SMART sant 4 59 IPR001005 -
Mal7g4701 299 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Mal7g4701 299 Gene3D - 2 59 - -
Mal7g4701 299 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4701 Mal-Chr7 115204052 115207698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4701 1 230 Single Myb Histone (SMH) Gene Family AT1G49950 52.282 1.28e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal7g4701 Linker_histone 8.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4701 K09422 - gmx:778173 290.812