Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4687 ATGCCAATGATGTTTCCTGGTATTAATAGAGAGGGAGAGATGTCAGCTATGGTCTCTGCTTTAACACATGTGATATGTGGTGATCAGAATAATGATGATGGTAGTGTTCTGAATCAGAATATGAATATGAATCAGAGTACATTTGAAGGAGATTGTGTTGATATCAAGCCTTTTGGTTCTTCTTCATCTTATGGTGGTAATTCTCTTCTCAAGAGAAGAAGGGAAGATGGTGGATTCTTTGACAATTCATCCTCTGCTATTCCCCAAGGTGTAGAATGTCCAAGCAACTGGACAAACACAATAACAACAACAGGAAGGAGCCAAATGGAAGAACAAATATACGAATACAGAACAGACAATAACATTAATGTGAAAAATGAAGAGCAACCAAAAAGAAAATACAGAGGAGTAAGACAAAGACCATGGGGAAAATGGGCTGCAGAGATAAGAGATCCTTTCAAAGCTACAAGAGTATGGTTAGGTACATTTGAAAACGCTGAAGATGCAGCCAAAGCCTATGATCAAGCTTCATTGCGTTTTAGAGGAAACAAAGCAAAACTCAACTTCCCTGAAAATGTTAGGCTCAAGGAACAACCGAACCATTTGAACATGCTACATTCTAATTTGTCACATCAATCTAGAACTGATCCAATGGTTCACAATGAAGTTCTTCATACTTTGCAAGGTTCAAACAAGTATTATGATTACTTTAATGGTCAAAACTTTCCTGTGGCTTCACTTCAAACTTCAATGTCACCGTCAGCTTCTTATTCTTCTTCTTCTTCTACGACTACTTTTGCTTCTTCTTTTAGTTCTCCTCAGACAACTTCTTCAATTCCTTCAGGTTATTCTACCCAGTTGCCAGCATGGTCTTCTGGATATAGCTCCTCTCCCTCAGGGTGA 903 0.3843 MPMMFPGINREGEMSAMVSALTHVICGDQNNDDGSVLNQNMNMNQSTFEGDCVDIKPFGSSSSYGGNSLLKRRREDGGFFDNSSSAIPQGVECPSNWTNTITTTGRSQMEEQIYEYRTDNNINVKNEEQPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFENAEDAAKAYDQASLRFRGNKAKLNFPENVRLKEQPNHLNMLHSNLSHQSRTDPMVHNEVLHTLQGSNKYYDYFNGQNFPVASLQTSMSPSASYSSSSSTTTFASSFSSPQTTSSIPSGYSTQLPAWSSGYSSSPSG* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4687 300 PANTHER DNA-BINDING DOMAIN PROTEIN 28 296 - -
Mal7g4687 300 SUPERFAMILY DNA-binding domain 133 191 IPR016177 GO:0003677
Mal7g4687 300 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Mal7g4687 300 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Mal7g4687 300 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Mal7g4687 300 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Mal7g4687 300 PANTHER DNA-BINDING DOMAIN 28 296 IPR044808 GO:0003700|GO:0009873
Mal7g4687 300 MobiDBLite consensus disorder prediction 258 300 - -
Mal7g4687 300 CDD AP2 133 192 IPR001471 GO:0003700|GO:0006355
Mal7g4687 300 Pfam AP2 domain 133 182 IPR001471 GO:0003700|GO:0006355
Mal7g4687 300 Gene3D AP2/ERF domain 132 192 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4687 Mal-Chr7 115021005 115022312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4687 4 201 AP2-EREBP Transcription Factor Family AT5G64750 43.750 2.02e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal7g4687 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4687 - - mtr:MTR_8g092460 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4687 7 115021005 115022312 Mal7g4687 7 115021005 115022312 ECH
Mal7g4687 7 115021005 115022312 Mal2g1570 2 18871562 18873089 ECH