Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4643 ATGGACGCGGCGGTCTTCTTTGAATCCGAATATCGTCCTCTTGCTCCTCTGGTTCAGGCCAAACGCAAGATCGACGACACAGCGGTCTCCTCTGAACTCGAATATCCTGCTCCTGATCTTCTTATCGATCCCGATTGGTTGCGTCATCTTCAAGATCAATGTTTCAACTTTGATGATTGTGATCATAATCACCAACACATTCTTTCTGATTATAGACCAAGACCTCCAGTAACTGTTGGAAGAGGTTTTCTTGTACTTACCTTTCTGGAATATTTTGTGGAGGATATGACTTCTGATTCTGGGCCCTATAATGAGAAGACCAATTCTGTTGTGGTAACCAACCTCCCGCTCCGCACACGTGACTCTGATTTATTTGACCTTTTCCATCCTTTTGGTGCGACCCTTGCTCATGTTGCTACTGCTAAAGACTTTGACTTTACTGGCCGCTTTGGCTTTGTTAACTTTGCCACCAGGGAACAAGCTCAGAAGGCTGTTGATAATGGGGGGTTTGTCTACCGCAATTACCCCCTTGGAGTTGAATGGGTCACCCCAAAAACAAGTTTGAATTGA 570 0.4509 MDAAVFFESEYRPLAPLVQAKRKIDDTAVSSELEYPAPDLLIDPDWLRHLQDQCFNFDDCDHNHQHILSDYRPRPPVTVGRGFLVLTFLEYFVEDMTSDSGPYNEKTNSVVVTNLPLRTRDSDLFDLFHPFGATLAHVATAKDFDFTGRFGFVNFATREQAQKAVDNGGFVYRNYPLGVEWVTPKTSLN* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4643 189 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 168 IPR000504 GO:0003723
Mal7g4643 189 Gene3D - 94 188 IPR012677 -
Mal7g4643 189 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 105 185 - -
Mal7g4643 189 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 108 184 IPR000504 GO:0003723
Mal7g4643 189 SUPERFAMILY RNA-binding domain, RBD 98 186 IPR035979 GO:0003676
Mal7g4643 189 SMART rrm1_1 109 180 IPR000504 GO:0003723
Mal7g4643 189 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 105 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4643 Mal-Chr7 114580630 114581547 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4643 108 189 Eukaryotic Initiation Factors Gene Family AT5G06000 51.190 3.95e-18 78.6