Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4639 ATGGACGACACCGTCAAGGAAGTGAAAGTCGTCCCGGTCTCCTCTGAACCCGAATATCCTGCTCCTGATCTCAAATGGTTGTTTGAAGATCCCAAATGGTTGCTTTTTCTTCATGATCTACGTTTCCACCTTTATGATTGTTCTCATCATCACCAAAACATTGGTTCTGATTATAGACCAACAGATTTAACTGTTGGAGGAGGTTTTTATGTACCTATCTTTATGAAATCTTTCGTGGAGGAGATGACTTCTGATTCTGGGCCCTATAATGACAAGACCAATTCTGTTGTGGTAACCAATCTCCCGCTCCGCACACGTGACTCTGAATTATTTGAGCTTTTCCGTCCTTTTGGTGCGACCCTTGCTCATGCTGCTAGTACTAAAGACGTTGAGTTTTATGGCTGCTTTGGCTTTGTTAACTTTGCCACCAGGGAACAAGCTCAGAAGGCTGTTGATAATGGGAGGTTTGTCTACCGCAGTCACCCCCTTGGAGTTGAATGGGTCACCCCAAAAACAACCTAA 522 0.4425 MDDTVKEVKVVPVSSEPEYPAPDLKWLFEDPKWLLFLHDLRFHLYDCSHHHQNIGSDYRPTDLTVGGGFYVPIFMKSFVEEMTSDSGPYNDKTNSVVVTNLPLRTRDSELFELFRPFGATLAHAASTKDVEFYGCFGFVNFATREQAQKAVDNGRFVYRSHPLGVEWVTPKTT* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4639 173 Gene3D - 78 173 IPR012677 -
Mal7g4639 173 SUPERFAMILY RNA-binding domain, RBD 81 171 IPR035979 GO:0003676
Mal7g4639 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 170 IPR000504 GO:0003723
Mal7g4639 173 SMART rrm1_1 95 166 IPR000504 GO:0003723
Mal7g4639 173 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 65 172 - -
Mal7g4639 173 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 65 172 - -
Mal7g4639 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 157 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4639 Mal-Chr7 114568500 114569373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4639 70 172 Eukaryotic Initiation Factors Gene Family AT5G06000 45.370 6.21e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4639 K03248 - fve:101304537 75.485