Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4626 ATGTCAGGTAATAAGAGAAACCAAACAAGTCCTGTAGGAAGTCCAACATCAGGAAACATCTCAGACAGTTCATCATCAAAAGAACAAGACAGGTTCCTACCAATTGCTAACGTGAGCCGTATAATGAAAAGAGCACTTCCAGCAAATGCTAAAATCTCAAAAGAAGCAAAAGAAACAGTTCAAGAATGTGTTTCTGAGTTCATAAGTTTCATCACTGGTGAAGCTTCTGATAAGTGTCAGAGAGAAAAGAGGAAAACAATTAACGGTGATGATCTTCTTTGGGCTATGACAACACTTGGTTTTGAAAATTATGTTGGTCCTTTGAAAGTTTATCTTAATAATTATAGGGAAACTGAGGGAGAAAAGAGTAATTCAAGTGCTACTAAACAAGATGATCAATATGATCATAATTCTTCAACTGAAGTTAATCATGATGTTGGTGGTGGATTCTATTCTCAAGTAATTGATCATGCTCCAAAGAGGTTTCAAGAGATTAATGGAGGGATTGTGGATTATAGAGTCATTGGTCAAAGTGTAGTGAATGGTACTGGTGATGAAACAGAACATGCAATTGTTGCAAGTGGTGGTAATAGAATCATGCCACCAAACCTACGTTACAGGGTTGAATGGTAG 633 0.3681 MSGNKRNQTSPVGSPTSGNISDSSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGEKSNSSATKQDDQYDHNSSTEVNHDVGGGFYSQVIDHAPKRFQEINGGIVDYRVIGQSVVNGTGDETEHAIVASGGNRIMPPNLRYRVEW* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4626 210 MobiDBLite consensus disorder prediction 122 139 - -
Mal7g4626 210 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mal7g4626 210 MobiDBLite consensus disorder prediction 119 142 - -
Mal7g4626 210 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 96 IPR003958 -
Mal7g4626 210 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 12 152 - -
Mal7g4626 210 MobiDBLite consensus disorder prediction 1 32 - -
Mal7g4626 210 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Mal7g4626 210 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Mal7g4626 210 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Mal7g4626 210 SUPERFAMILY Histone-fold 29 144 IPR009072 GO:0046982
Mal7g4626 210 Gene3D Histone, subunit A 19 145 IPR009072 GO:0046982
Mal7g4626 210 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 12 152 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4626 Mal-Chr7 114413713 114414345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4626 24 133 CCAAT-HAP3 Transcription Factor Family AT4G14540 81.818 3.02e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal7g4626 CBFD_NFYB_HMF 1.1e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4626 K08065 - gmx:100810059 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4626 7 114413713 114414345 Mal7g4626 7 114413713 114414345 ECH