Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4617 ATGAAAATTCTCTCTGAGCTCTTATATCAGCTTTATGTCAAAACAATAGTTCTATTTACATTTATGCTAATAGAACTTTTCCTTGTCATTTGTTACCTAAAGTCAACTAAAAATCCAATTACCACTACCCAATACCTCAATTTCATTGAAGAGAAGAACCCCACAAGAAGTTTGAAGAAGCCTGCAGATCACATAGATTGCAGGGTATGTTTATGTGAGTTTGAGGAAGGGGACATTGTGAGGAACTTGAACTGTGAACACACATTTCATAAGGATTGTTTGGACAAGTGGTTCTTGCAAAAACAATATTGTGCTACTTGTCCACTTTGCAGGAACAAAGTTTTGTCAGATGATGTTGCTTCAAAGTATTGTTTGCTTCAAAATCAGGTAGAATTTGATGGGATTGATGATCACTTTATGGCTTTGTTATCTTCATTGAGAGGTGGTAGTATTTGGTATAGATATCTCTAA 471 0.3503 MKILSELLYQLYVKTIVLFTFMLIELFLVICYLKSTKNPITTTQYLNFIEEKNPTRSLKKPADHIDCRVCLCEFEEGDIVRNLNCEHTFHKDCLDKWFLQKQYCATCPLCRNKVLSDDVASKYCLLQNQVEFDGIDDHFMALLSSLRGGSIWYRYL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4617 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 116 IPR013083 -
Mal7g4617 156 ProSiteProfiles Zinc finger RING-type profile. 67 111 IPR001841 -
Mal7g4617 156 SMART ring_2 67 110 IPR001841 -
Mal7g4617 156 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 151 - -
Mal7g4617 156 PANTHER - 1 151 - -
Mal7g4617 156 Pfam Ring finger domain 66 111 IPR001841 -
Mal7g4617 156 SUPERFAMILY RING/U-box 66 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4617 Mal-Chr7 114249732 114250202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4617 66 122 C3H Transcription Factor Family AT1G15100 52.632 8.62e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4617 K16282 - gmx:102661133 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4617 7 114249732 114250202 Mal7g4617 7 114249732 114250202 ECH