Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4612 ATGGGATTGAGAGATCGTAGTAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGCCAGAGCTCGTCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTATTGGATCTTATAGATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGTTCGTTTAATGTGAAGATCCAGGCAGCAACTGTCTTGGGCACACTTTGTAAAGAAAATGAACTGAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCACCATTGCTTGGTCTGCTAAAGTCCAGTTCTACTGAAGGCCAAGTTGCTGCTGCAAAGACTATATATGCTGTCTCTCAAGGTGGCGTGAAAGATCATGTTGGCTCAAAAATATTTTCAACCGAAGGAGTAGTACCAGTGCTTTGGGATCAGTTGCGAACTGGTATGAAAACCGGAAATGTAGTTGAAAGTTTATTGACGGGAACATTGAAAAATCTCTCCAGCAATGCTGAGGGATTCTGGAGTGCAACAATTCAAGCCGGAGGAGTGGATATATTAGTGAAGTTATTGGCAACAGGGCAGCCTAACACTTTAGCCAATGTTTGCTTTTTACTTGCTTCTGTAATGATGGAGGATGCATCTGTTTGTTTGAAAGTGTTGAATGCTGAGGTGACTAAACAACTCTTGAAACTATTAGGCCCCGGTAATGATGACCTCGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTATCTGCTCAGTGCAAAGAGGCGAGGCGGGAGATAGCCAGTTCTAACGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCTAAAGAATACATGCAGGGTGAATGTGCTCAAGCATTACAAGAGAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCTTATGTCATATCTAGCCTCGGGCAAAGCCTTGAATCATGCTCTTCCCCTACCCAAATTGCCGACACTTTAGGAGCTATAGCATCAGCTCTTATGATATATGATAACAAGGCAGAATCTACCAAACCATCAGATCCTTCGGTGGTTGAACAGACATTACTCAAACAATTCAAACCTCACTTGCCCTTCCTTGTGCAAGAACGGACCATTGAAGCTCTAGCTAGTTTGTATGGCAATCCTGTACTCTCAACTAAACTAGCAAATTCCGATGGAAAACATTTGCTTGTTGGTTTGATAACAATGGCTGCCGATGAAGTGCAAGATGAGCTTATAAAATCTCTTTTGACACTATGCAAAAGTGAAGGAAGCCTATGGCATTCACTTCAGGGTCGTGAAGGAGTTCAGCTATTGATATCTCTTCTTGGTCTTTCATCAGAACAGCAGCAAGAATGTGCGGTTGCCTTGCTTTGCCTTTTATCTAATGAAAACGATGAAAGTAAATGGGCAATTACTGCTGCTGGTGGTATACCCCCACTTGTTCAAATTTTGGAGACAGGATCTGCAAAAGCAAAGGAAGACTCGGCAAGAATCCTTAAGAATTTGTGCAATCATAGTGAAGATATACGTGCTTGCGTTGAAAGTGCAGATGCTGTTCCTGCATTGCTGTGGCTATTGAAGAATGGAAGTCCTAACGGGAAGGATATTGCAGCAAAGACGATAAATCATTTAATTCATAAATCTGATACTACGACTATCAGTCAGCTTACAGCCTTATTGACAAGTGACCTTCCTGATTCTAAGGTATATGTTTTGGATGCTTTGAGAAGTATGCTTTGTGTTGCTCCTCTTAGCGACATTTTACGTGAAGGTAGTGCCGCCTGTGATGCATTTGACACCATGATAATGTTATTGAGCTCAACAAAGGAAGAAACTCAGGCAAAATCTGCATCAGCTCTGGCCGAAATTTTCGAAGCAAGGAAAGATTTGCGTGAAAGTAGCATTGCTGTCAAAACTCTTTGTTCATCCATGAAATTGCTTAATGTTGAATCTGAAGATATCCTAAGGGAGTCCTCAAACTGCCTGGCTGCAATACTTCTTTCCATCAATGAGAACAAGGATGTAGCAGCTGTTGCTAAAGATACATTATCCCCCCTAGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTGGCAGAAATGGCCATAGGTGCTGTAGCGAATCTTATTTTGTATATTGAAATAGGAAAGAAAGTTGTTGCAGAAGAAGTTATCTTGCCGGCTACCAGAGTATTACAGGAAGGCACAATTTCTGGAAAAACTCATGCTGCAGCAGCAATCGCTCGCCTCTTACATTCTCAGAAAGTTGATAATGCTGTTACTGATTGTGTGAATCGCGCTGGCACTGTTCTTGCATTAATTTCTTTTTTGGACTCCTCCATCAGTGGATCTGTTGACACATCGGAGGCTCTAGAAGCCCTTGCCATTTTATCTAGGCCAGAAGAGACAGATGCAAATATTAAACCAGCATGTGCAGTTTTGGCTGAATCCCCTAAAAGCATAATCCCAATAGTCCTATGCATTGCTAATTCAACACCGACGTTGCAAGATAAAACAATTGAGATTTTATCTCGATTATGTAAAGATCAGCCTGTTGTTTTAGGAGATACTGTTGCTTCTGCCTCTGGATGTATATCTTCAATAGCTAAGAGGATAATTAGTTCCACAAATGTAAAGGTCAAAATTGGTGGTGTTGCGCTTCTTATTTGTGCTGCAAAAGCAAATCATCGGAGACTGGTGGAGGATATCAATATATCAAACTTGTCTGTTAACCTTATTCAGTCTCTAGTTGATATTCTTATTTCTACACAGTATTCTTTGGCTAATCATGGTGATGATGATGACAAGGAATCCATCAGCATATGCAGGCATACAAAAGAAGAGGACAACGGTCGTGAATACAAAACTGGAACTTCCATCGTATGTGGTGTTGATTTAGCTATATGGTTACTGTCTATTCTTGCTTGTCATGATGAAAAAAATAAAACTGCAACAATGAAGGCTGGAGCAATTGATGTTGTCACCGACAGGATCTCAAATTGTTACTCACAATATTCTCAGATTGACTACAAAGAAGATAACAGCATGTGGATTTGTGCCCTGTTGTTGGCAATATTATTTCAAGATAGAGATATCATACGGGCACATGCAACCATAAAGTCTGTACCAGCACTTGCCAATTTATTGAAGTCAGACGAAACGGAGAACAAATATTTTGCTGCACAATCAATAGCCAGCCTTGTTTGCAATGGTAGCAGGGGAACTCTTCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACCGATATACAAGATCTTCTCGAATTGTCCGAGGAATTTTCTTTAGTGCGTTATCCTGATCAAGTGGCTCTAGAGAGGTTGTTTAGAGTTGATGATATAAGAGTTGGCGCAACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTTCTCAAACCAATTCCTGATCGCCCAGGTGCACCATTTTTAGCTCTCGGGCTTTTGACTCAACTTGGTAAAGATTGTCCGTCAAATAAGACTATAATGGTAGAATCGGGGGCTTTAGAGGCTCTTACAAAGTATCTTTCCCTTGGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGTAGTGCTGATATACGAAAACACAACTCTTCATTTGGTGCTGTTACTCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCATTGGAAAGTTTATTTTGTGCGGACCACATTAGAAATGCTGAGATTGCTCGACAAGCTGTTCAACCCTTGGTAGAAATTCTTAATACCGGTTCAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGATTGGGTTACTGAGTGAAAACCCATCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTATAGGATCCTTTCGTCAAATTGTTCAATGGACCTCAAAGGGGACGCTGCGGAATTATGCTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACAATGGCTGCTGCACGATGCGTTGAACCACTAGTCTCTCTCCTTGCTACCGAGTTTAGTCCTGCTCATCATCATTCAGTTGTCCGGGCATTGGATAGGCTTGTTGACGATGAGCAACTGGCTGAATTAGTTGCTGCAAATGGTGCGGTTGTTCCTCTTGTTAGTCTATTGTCTAGTAGAAACTATGTACTTCACGAGGCCATTTCTAGAGCTCTGGTGAAGTTAGGAAAAGACAGACCTGCTTGTAAAATGGAAATGGTAAAAGCTGGAGTCATTGAAAGCGTACTGGACATCTTACACGAAGCACCTGATTATTTGTGTGCAGCTTTTGCAGAACTGTTGCGTATATTAACCAACAATGCTACCATAGCTAAAGGACCATCAGCCGCTAAAGTTGTTGAACCCTTGTTTTTGTTGTTGACAAGGCACGATGTTGGGCCTGATGGACAGCACAGTGCAATGCAGGTTTTGGTTAATATGTTAGAACATCCACAGTGTCGTGCTGACCATTCATTGAAATCTCACAAAGTTATTGAACCACTTATTCCTTTGCTTGATTCACCGATATCCGTAGTGCAGCAGTTGGCTGCTGAGCTTCTTTCACATCTTCTCCTAGAACAACACCTTCAGAAGGATCCAGTGACACCGAAGGCAATTGTCCCTCTTATAAGAATTCTCGGTTCTGGTATACCTTTATTGCAGCAGAGAGCTGTAAAGGCCCTAGTTAGTATTGCACTAACATGGCCGAACGAAATTGCCAAAGAGGGTGGTGTTGTTGAGATTTCCAAAGTGATATTGCAAGCTGATCCTTCCCTTCCTCATGCTTTATGGGAATCTGCTGCGTCTGTTCTGTCAAGTATTCTGCAATTTAGCTCAGAATTCTACTTGGAAGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTCGATCTGGCTCAGAGAGCACAGTTATCGGTGCATTAAATGCTCTTCTTGTTTTGGAAAGTGATGATGGAACCAGTGCAGAAGCTATGGCTGAAAGTGGTGCAATAGAGGCTCTCTTGGAGCTCCTAAGATCTCATCAGTGTGAGGAAACCGCTGCACGTCTCTTAGAAGTACTGTTGAACAACGTAAAGATCAGAGAAACGAAAGTTACTAAATCAGCCATCTTACCGTTATCACAGTATCTCTTGGATCCACAAACCCAAGCACAACACGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTATTCCAGAATGAGGCTCTTGCTCGAACAGGTGATGCAGTTTCTGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCGACAGAAGAAATGAAAGTTGTTGCTATATGTGCTTTGCAAAATCTTGTGATGTACAGTCGATCAAATAGAAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATAAGTTCAAGTAATCCTGAAACTTCTGTTCAGGCTGCAATGTTTCTTAAACTTCTGTTCTCAAATAATACCATTCAAGAGTATGCTTCTAGCGAAACAGTCAGAGCAATCACTGCCACAATTGAAAAAGATTTATGGGCGAGTGGAACTGTGAATGAAGAATATCTGAAAGCATTAAATTCTCTATTTAGCAACTTCCCACGGCTGAGAGCAACTGAACCGGCAACACTTAGCATTCCTCACCTTGTCACATCCTTAAAGACAGGTTCAGAAGCTTGTCAGGAAGCTGCCTTGGATGCACTTTTTCTGCTCCGACAAGCTTGGTCAGCATGCCCTGCTGAAGTTTCAAGAGCTCAGTCAATTGCAGCTGCAGACGCTATTCCTTTCCTGCAGTACTTAATCCAGTCTGGTCCGCCTAGATTTCAGGAGAAGGCGGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCGTCAAGCGTGGTAACAATATGAAACAGTCTGTCGGAAACCCAAGCGTTTACTGCAAGATAACACTTGGCAATAATCCCCCAAGACTAACCAAGGTGGTCTCAACTGGTCCTAATCCGGAGTGGGATGAGAGCTTTACATGGTCCTTTGAGAGTCCTCCAAAAGGACAGAAGCTTCACATTTCTTGCAAAAACAAGAGCAAAGTGGGAAAAAGTAAATTCGGGAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTCGGAGCCGTAGCTGGTGAGTACACTCTTTTGCCTGCAAGTAAAAGTGGACCCCCAAGGAATCTAGAAATAGAATTTCAGTGGTCTAACAAAGTAAGTGATACAACAACTGATACTGTTCAGCAATAA 6366 0.4257 MGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLLDLIDMRENAFSAVGSHSQAVPVLVSLLRSGSFNVKIQAATVLGTLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQVAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWDQLRTGMKTGNVVESLLTGTLKNLSSNAEGFWSATIQAGGVDILVKLLATGQPNTLANVCFLLASVMMEDASVCLKVLNAEVTKQLLKLLGPGNDDLVRAEAAGALKSLSAQCKEARREIASSNGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCSSPTQIADTLGAIASALMIYDNKAESTKPSDPSVVEQTLLKQFKPHLPFLVQERTIEALASLYGNPVLSTKLANSDGKHLLVGLITMAADEVQDELIKSLLTLCKSEGSLWHSLQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSARILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTINHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLCVAPLSDILREGSAACDAFDTMIMLLSSTKEETQAKSASALAEIFEARKDLRESSIAVKTLCSSMKLLNVESEDILRESSNCLAAILLSINENKDVAAVAKDTLSPLVALANSSVLEVAEMAIGAVANLILYIEIGKKVVAEEVILPATRVLQEGTISGKTHAAAAIARLLHSQKVDNAVTDCVNRAGTVLALISFLDSSISGSVDTSEALEALAILSRPEETDANIKPACAVLAESPKSIIPIVLCIANSTPTLQDKTIEILSRLCKDQPVVLGDTVASASGCISSIAKRIISSTNVKVKIGGVALLICAAKANHRRLVEDINISNLSVNLIQSLVDILISTQYSLANHGDDDDKESISICRHTKEEDNGREYKTGTSIVCGVDLAIWLLSILACHDEKNKTATMKAGAIDVVTDRISNCYSQYSQIDYKEDNSMWICALLLAILFQDRDIIRAHATIKSVPALANLLKSDETENKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGKDCPSNKTIMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSADIRKHNSSFGAVTQLVAVLRLGGRGARYSAAKALESLFCADHIRNAEIARQAVQPLVEILNTGSEREQHAAIAALIGLLSENPSRALAVADVEMNAVDVLYRILSSNCSMDLKGDAAELCCALFGNTRIRSTMAAARCVEPLVSLLATEFSPAHHHSVVRALDRLVDDEQLAELVAANGAVVPLVSLLSSRNYVLHEAISRALVKLGKDRPACKMEMVKAGVIESVLDILHEAPDYLCAAFAELLRILTNNATIAKGPSAAKVVEPLFLLLTRHDVGPDGQHSAMQVLVNMLEHPQCRADHSLKSHKVIEPLIPLLDSPISVVQQLAAELLSHLLLEQHLQKDPVTPKAIVPLIRILGSGIPLLQQRAVKALVSIALTWPNEIAKEGGVVEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQHARLLATLALGDLFQNEALARTGDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNRRAVAEAGGVQVVLDLISSSNPETSVQAAMFLKLLFSNNTIQEYASSETVRAITATIEKDLWASGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIVKRGNNMKQSVGNPSVYCKITLGNNPPRLTKVVSTGPNPEWDESFTWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGAVAGEYTLLPASKSGPPRNLEIEFQWSNKVSDTTTDTVQQ* 2122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4612 2121 Coils Coil 254 274 - -
Mal7g4612 2121 Gene3D - 777 1128 IPR011989 -
Mal7g4612 2121 SUPERFAMILY ARM repeat 26 351 IPR016024 -
Mal7g4612 2121 Gene3D - 1359 1575 IPR011989 -
Mal7g4612 2121 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 2110 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mal7g4612 2121 SUPERFAMILY ARM repeat 196 734 IPR016024 -
Mal7g4612 2121 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1989 2097 IPR035892 -
Mal7g4612 2121 Gene3D - 1135 1358 IPR011989 -
Mal7g4612 2121 Gene3D - 362 776 IPR011989 -
Mal7g4612 2121 Gene3D - 1576 1988 IPR011989 -
Mal7g4612 2121 Gene3D - 7 361 IPR011989 -
Mal7g4612 2121 SMART arm_5 774 816 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1356 1397 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 482 522 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1525 1566 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1398 1438 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1142 1185 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1689 1728 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1269 1310 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1440 1480 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 93 133 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 689 728 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 225 266 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 524 564 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 51 92 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 268 317 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1187 1228 IPR000225 GO:0005515
Mal7g4612 2121 SMART arm_5 1816 1856 IPR000225 GO:0005515
Mal7g4612 2121 SUPERFAMILY ARM repeat 1636 1987 IPR016024 -
Mal7g4612 2121 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1154 1198 IPR000225 GO:0005515
Mal7g4612 2121 SUPERFAMILY ARM repeat 1059 1527 IPR016024 -
Mal7g4612 2121 ProSiteProfiles C2 domain profile. 1970 2087 IPR000008 -
Mal7g4612 2121 CDD C2 1991 2081 - -
Mal7g4612 2121 Pfam C2 domain 1989 2080 IPR000008 -
Mal7g4612 2121 Pfam Armadillo/beta-catenin-like repeat 482 521 IPR000225 GO:0005515
Mal7g4612 2121 Pfam Armadillo/beta-catenin-like repeat 61 91 IPR000225 GO:0005515
Mal7g4612 2121 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 2110 - -
Mal7g4612 2121 SMART C2_3c 1990 2086 IPR000008 -
Mal7g4612 2121 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 493 535 IPR000225 GO:0005515
Mal7g4612 2121 Gene3D C2 domain 1989 2119 IPR035892 -
Mal7g4612 2121 SUPERFAMILY ARM repeat 618 1021 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4612 Mal-Chr7 114205435 114213906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4612 1176 1417 U-box Gene Family AT1G71020 30.677 2.54e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4612 - - mtr:MTR_8g091470 3774.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4612 7 114205435 114213906 Mal7g4612 7 114205435 114213906 ECH