Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4574 ATGCCGCCGACGTCGAAGTCTGTTATTGAAAAGCTGCCGATTATTGAAGCTACCAGGGAGTTGCTGGAATCAGATTCATCTCAGTGTTTTGTGTGTAAAGACACATTTGCCCTTGGCGAAAAGGCGAAGCAGGTGCTGTGTAAACATATAAATCATGATGAATGTATCTTGTCGTGGTTGGAATTGCATAATTCTTGTCTTGTTTGTCCAACAACTTTTGGTGGTGGTGCTGGAGGAGGAGTTGGTGGTGGTTCTGGTGGTGGAGGGTCTGATGATTTAGTGAGGACAAGGTTTAGGGTTTCTTTGTCGTTTATGTCGTTCCAGCATGTACCTTCGTCTTTTGGTGCTGTTGCAGGGACAAGCAATGTGAATAATAATGATAGCAATAGTGGAAATGGTAGTGGGCAGCCCAATGCTGAGAATATGGGGAATCAGAATTTTGAGTTAGAGAATATACAAGAAGATCTTTATTGA 474 0.4283 MPPTSKSVIEKLPIIEATRELLESDSSQCFVCKDTFALGEKAKQVLCKHINHDECILSWLELHNSCLVCPTTFGGGAGGGVGGGSGGGGSDDLVRTRFRVSLSFMSFQHVPSSFGAVAGTSNVNNNDSNSGNGSGQPNAENMGNQNFELENIQEDLY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4574 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 74 IPR013083 -
Mal7g4574 157 ProSiteProfiles Zinc finger RING-type profile. 29 70 IPR001841 -
Mal7g4574 157 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1 2 69 - -
Mal7g4574 157 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 2 69 - -
Mal7g4574 157 SUPERFAMILY RING/U-box 9 73 - -
Mal7g4574 157 MobiDBLite consensus disorder prediction 118 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4574 Mal-Chr7 113797773 113798281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4574 2 69 C3H Transcription Factor Family AT5G15820 50.000 1.68e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4574 - K11982 mtr:MTR_6g079660 187.578