Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4531 ATGGTTTTTCATCTTAGAAATCTCCTTCATTTTTATCATTACCATGATAGCCCAAACCCTTCCCCTCAACAATCACCATTTTCATACAATTCCTACCAAATACTTCATCATTTCCATATCCATAACTATATCCACATACTTCATGTCGCTATCATTGCCATGCTTTGCATTGTTACCACGGCTATGCTTCTTTTCATCTTTTTCATATCCATAAGGAACTATCACTCAAGGAGACAAAACCATAACCGTGATCGAAGAAACACACCGATATTGTTCGATGTCCATGGTCATAGAGATTCAACTATTTCAAATGATGATGATGAAAATGAGAGGGTTATTGATCACCCTATATGGTTCATCCGTACCGTAGGGCTTCAACAATCGGTGATAGATTCCATTACGGTCTTCAAATACAGGAAAGACGAAGGGCTCGTTGATGGGACAGAGTGTTCTGTTTGTCTAGGTGAATTTCAAGAGGAAGAGAATCTCAGAATTTTGCCTAAGTGTAGTCATGCTTTTCATATACCTTGCATTGACACTTGGCTTAGATCACACAAAAATTGTCCTCTGTGTCGTGCGCCTGTGGTCAATGATGCTGCAGAGGTGACTGTTACAGTCACTGACAGTGATCAGCTTGATTCAAATGTTTCTGATGAGAATAATGTTGTTGTGGAAGGATTAGGATCACATAATGTAGGAGAGTTTGAGATTAGAATTGATAATGATTCTGGTGTTTCTTCTAGTGAAAGACCAAATAAAATTAATATTGCTTAA 774 0.3798 MVFHLRNLLHFYHYHDSPNPSPQQSPFSYNSYQILHHFHIHNYIHILHVAIIAMLCIVTTAMLLFIFFISIRNYHSRRQNHNRDRRNTPILFDVHGHRDSTISNDDDENERVIDHPIWFIRTVGLQQSVIDSITVFKYRKDEGLVDGTECSVCLGEFQEEENLRILPKCSHAFHIPCIDTWLRSHKNCPLCRAPVVNDAAEVTVTVTDSDQLDSNVSDENNVVVEGLGSHNVGEFEIRIDNDSGVSSSERPNKINIA* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4531 257 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Mal7g4531 257 SUPERFAMILY RING/U-box 130 198 - -
Mal7g4531 257 SMART ring_2 150 191 IPR001841 -
Mal7g4531 257 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 23 234 IPR044675 -
Mal7g4531 257 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 201 IPR013083 -
Mal7g4531 257 CDD RING-H2_PA-TM-RING 149 192 - -
Mal7g4531 257 PANTHER RING-H2 FINGER PROTEIN ATL54 23 234 - -
Mal7g4531 257 Pfam Ring finger domain 149 192 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4531 Mal-Chr7 113233971 113234744 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4531 112 250 C3H Transcription Factor Family AT4G33565 48.201 1.03e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4531 - - mtr:MTR_8g089880 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4531 7 113233971 113234744 Mal7g4531 7 113233971 113234744 ECH