Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4528 ATGGTTTTTCATCTTAGAAATCTCCTTCATTTTTATCATTACCATGATAGCCCAAACCCTTCCCCTCAACAATCACCATTTTCATACAATTCCTACCAAATACTTCATCATTTCCATATCCATAACTATATCCACATACTTCATGTCGCTATCATTGCCATGCTTTGCATTGTTACCACGGCTATGCTTCTTTTCATCTTTTTCATATCCATAAGGAACTATCACTCAAGGAGACAAAACCATAACCGTGATCGAAGAAACACACCGATATTGTTCGATGTCCATGGTCATAGAGATTCAACTATTTCAAATGATGATGATGAAAATGAGAGGGTTATTGATCACCCTATATGGTTCATCCGTACCGTAGGGCTTCAACAATCGGTGATAGATTCCATTACGGTCTTCAAATACAGGAAAGACGAAGGGCTCGTTGATGGGACAGAGTGTTCTGTTTGTCTAGGTGAATTTCAAGAGGAAGAGAATCTCAGAATTTTGCCTAAGTGTAGTCATGCTTTTCATATACCTTGCATTGACACTTGGCTTAGATCACACAAAAATTGTCCTCTGTGTCGTGCGCCTGTGGTCAATGATGCTGCAGAGGTGACTGTTACAGTCACTGACAGTGATCAGCTTGATTCAAATGTTTCTGATGAGAATAATGTTGTTGTGGAAGGATTAGGATCACATAATGTAGGAGAGTTTGAGATTAGAATTGATAATGATTCTGGTGTTTCTTCTAGCTAA 747 0.3869 MVFHLRNLLHFYHYHDSPNPSPQQSPFSYNSYQILHHFHIHNYIHILHVAIIAMLCIVTTAMLLFIFFISIRNYHSRRQNHNRDRRNTPILFDVHGHRDSTISNDDDENERVIDHPIWFIRTVGLQQSVIDSITVFKYRKDEGLVDGTECSVCLGEFQEEENLRILPKCSHAFHIPCIDTWLRSHKNCPLCRAPVVNDAAEVTVTVTDSDQLDSNVSDENNVVVEGLGSHNVGEFEIRIDNDSGVSSS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4528 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 201 IPR013083 -
Mal7g4528 248 ProSiteProfiles Zinc finger RING-type profile. 150 192 IPR001841 -
Mal7g4528 248 SMART ring_2 150 191 IPR001841 -
Mal7g4528 248 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 23 231 IPR044675 -
Mal7g4528 248 SUPERFAMILY RING/U-box 130 198 - -
Mal7g4528 248 CDD RING-H2_PA-TM-RING 149 192 - -
Mal7g4528 248 Pfam Ring finger domain 149 192 IPR001841 -
Mal7g4528 248 PANTHER RING-H2 FINGER PROTEIN ATL54 23 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4528 Mal-Chr7 113198532 113199278 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4528 49 242 C3H Transcription Factor Family AT1G72220 40.394 2.08e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4528 - - mtr:MTR_8g089880 381.719