Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4482 ATGGAAAATACACTTGAATCTTCCATCAGTCCACAACATAAAAAGATATCATCCAGATGGGATCCAGTCGAAGCATGTCGGCCTATAGTCGGTGAGGCACCTGTGTTTTATCCAACGTTTGAGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATACGTCCCTTAGCTGAACCGTATGGCATATGTAGAATTGTCCCTCCAGCTTGCTGGACACCACCTTGCCCTCTTAAGGAGAAAGAGATATGGGAAAATGCTAAATTTCCGACCCGTATTCAGCAAGTGGATTTGCTTCAGAACCGAGAGCCGATGAGGAAGAAAAGTAGGGGAAGAAAACGAAAACGTAGAAAGCAGTCAAAGATGGGAACATGTAGTAGAAGAACTGGAAATTCATGTTCTGAAGCTAATGCTACTTCTGAATCTGATGATAAGTTTGGATTCCAATCAGGGCCAGACTTCACACTTAAAGATTTTCAGCAATATGGAAATTCTTTTAAAGATTGCTACTTCGGTTTAAATGATGCCAAAGATGGTAGAGGTAGTGATAATAATCACCATGAGAGACAGGGGCCATCTGTGGAGGAAATTGAAGGTGAATACTGGCGAATAATAGAGCAACCTACTGATGAGGTCGAGGTGCATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGACATCGTCCTTAACTAAGAGTGATTCCGATTTGTATGCTATGTCTGGCTGGAATCTGAATAACTTTGCGCGACTGCCAGGTTCTGCATTATGTTTTGAAGGAAGTGACATCTCAGGAGTTTTAGTTCCATGGCTGTATGTTGGAATGTGCTTTTCCACATTTTGCTGGCATGTTGAAGATCATCACCTCTATTCACTTAATTATCTGCACTGGGGTGACCCTAAAGTATGGTATGGTGTACCTGGGGGCCATGCTTCAGCTCTGGAAGATGCAATGAGGAAACACTTGCCTGATTTGTTTGAAGAACAACCAAATTTACTCAATGAGTTGGTTACTCAGTTCTCTCCTTCAATACTTAAGTCTGAGGAGGTGCCTGTGTATCGCACTGTCCAGCATTCTGGGGAATTTGTTATCACGTTTCCAAGGGCATACCATTGTGGCTTCAGCTGTGGCTTCAATTGTGCGGAGGCTGTGAATGCGGCTCCATATGATTGGTTTGTGCATGGTCAGAACGCTGCCGAGATTTACAGTTGGCAGTGTCGTAAGACATCATTGTCCCATGATAAGTTGTTATTTGGATCTGCTAAGGAAGCTGTACATGCCCTTTCAGAGACAACTCATCATGGAAAAGAAAATATAAAATATTTAAATTGGAGAAATGCTTGTGGGAAAGATGGAGTTCTTACCAATGCGGTTAAGACAAGGATAACGATGGAAAAAGAGAGGCTTGAATGGCTTCTGAATCATTTAAAGACGCTGAAGATGGACAATGACTTTGATTCAGTTGAGGAAAGGGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCCGCTGTTGGTTGCGAGTGCTCCCCTGACAGCTATTCTTGTCTTAGACATTTCAAGTTGTTTTGCTCATGTGAAATGGATAAAAGATTTGTTCTGGTTCGTTATACAATAAATGAGCTAAGCACATTGGTTGAAGCATTAGAAGGAGAACCCAGCGCAATAGAAGCGTGGGAAACTAGAAACATTGGAGTTGTTTCTTCTAGTGTTGAGGATGCTTGCATGCACGAACAAGATATGGAGAGAGTCATGTGCAAAACCGAGAATTACAAAGAAGGTAAAAGCTCGCCGCCTTCTTGTACAGGAACTAATGAGAGGTCAAATTCAAATTTACCTAGCAGTCCTCACAGTCACATTTCTTCAGAGTTGGTCCATTTAGAGTCTCATCATGAAATTTCTTGTACACCATATGCGGGTATGAATGGCGTTAAGGACATCATGAATGATACTAAGTTGGTCATGGACGGCGAAGTTATGGAGGATAAGGGAAGTTCTTTGTACTTGAATATTGATGGTATGTCCAATAAACCTGAAAATTCTTTGCTAAATATAGCTGAAATCCATCACAATAAGTGTGTTCCAATTGCTGAAAAAGTCAGTAGTGCAGAGATCAGAAAAGAACAAGACAGCATGGAACTTAGTGCTGATGGTATTTCTGTCTTGGAAAAAGAACTTTCAGCGAGTCCAGCTAATGTTCGAAATTCCAGTACAGTTGATGGTTGTAAATTGTTTGGTGTCGATCTGCAAATGCACTCATTTTCAGGACAGAAACTCAATAGTACGTTTGAAACAGGAGTTATAGACACCTCCAATACAATTATATCTTTGACAAACCAAAGCTCCCCAATGCAAAAGTTTAGTATTTTTGTTGAGCTTGTTAGTTTGGGATCTGTTGTGTATGGAAAACACTGGTGCAGTAAGCATGCAATATATCCAAAAGGATTCAAGAGTCGTGTAAAGTTCTTTAGCATTCTTGATCCAGCAAGCATCTGTAACTATGTTTGTGAAGTCAATTCTGCTGGATTTCTTGGCCCTTTTTTCAGGGTTACCTTGGAAGAACATCCGAACGAGGTTTTCACAAACACCTCAGCAGATAAGTGCTGGGAAACAGTTACTGATAGACTAAACTATGAAATAAATAGGCGCAGGAGTCTCGGTGAACTAGACATGCCTCCCTTGGAGCTACGACACAACATCAATGGTCATAAAATGTTTGGATTCCTTTCGCCGTCCATTATTCAGTCCATTGAAGCTCAAGATCCTAGTCACCAATGTGTAGAGTACTGGAATCACAAACAAGTTAGTTCTGGATCTTCAGGCAAACCCATTGACAACTCTAAGTTAACTTGCGGTACAAGTAATAGCTCTCTAGGTGACTCGAGGACCAAACTTTTTGGTGTCGATTTGATAAAGCTGGAGGAGGATGACATAGGAGAAACATCTCATTCGTTCGAAGAGATGAAGTTGATTATGGAAAGATTCCTGAAAAAGGCAAGTCCTGATGAGTTAGGATCAATGCGTAAGTTATTCAGTTCTGATGCACAATTGACTCAGTGGAGACCAGCGTTGATAATGCTGATAGAGAAAATCCAAAAAGATTCTGAATAA 3123 0.4108 MENTLESSISPQHKKISSRWDPVEACRPIVGEAPVFYPTFEEFEDTLGYIAKIRPLAEPYGICRIVPPACWTPPCPLKEKEIWENAKFPTRIQQVDLLQNREPMRKKSRGRKRKRRKQSKMGTCSRRTGNSCSEANATSESDDKFGFQSGPDFTLKDFQQYGNSFKDCYFGLNDAKDGRGSDNNHHERQGPSVEEIEGEYWRIIEQPTDEVEVHYGADLETGALGSGFPKTSSLTKSDSDLYAMSGWNLNNFARLPGSALCFEGSDISGVLVPWLYVGMCFSTFCWHVEDHHLYSLNYLHWGDPKVWYGVPGGHASALEDAMRKHLPDLFEEQPNLLNELVTQFSPSILKSEEVPVYRTVQHSGEFVITFPRAYHCGFSCGFNCAEAVNAAPYDWFVHGQNAAEIYSWQCRKTSLSHDKLLFGSAKEAVHALSETTHHGKENIKYLNWRNACGKDGVLTNAVKTRITMEKERLEWLLNHLKTLKMDNDFDSVEERECFSCFYDLHLSAVGCECSPDSYSCLRHFKLFCSCEMDKRFVLVRYTINELSTLVEALEGEPSAIEAWETRNIGVVSSSVEDACMHEQDMERVMCKTENYKEGKSSPPSCTGTNERSNSNLPSSPHSHISSELVHLESHHEISCTPYAGMNGVKDIMNDTKLVMDGEVMEDKGSSLYLNIDGMSNKPENSLLNIAEIHHNKCVPIAEKVSSAEIRKEQDSMELSADGISVLEKELSASPANVRNSSTVDGCKLFGVDLQMHSFSGQKLNSTFETGVIDTSNTIISLTNQSSPMQKFSIFVELVSLGSVVYGKHWCSKHAIYPKGFKSRVKFFSILDPASICNYVCEVNSAGFLGPFFRVTLEEHPNEVFTNTSADKCWETVTDRLNYEINRRRSLGELDMPPLELRHNINGHKMFGFLSPSIIQSIEAQDPSHQCVEYWNHKQVSSGSSGKPIDNSKLTCGTSNSSLGDSRTKLFGVDLIKLEEDDIGETSHSFEEMKLIMERFLKKASPDELGSMRKLFSSDAQLTQWRPALIMLIEKIQKDSE* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4482 1040 SMART fyrc_3 851 943 IPR003889 GO:0005634
Mal7g4482 1040 Pfam F/Y-rich N-terminus 795 842 IPR003888 GO:0005634
Mal7g4482 1040 Pfam F/Y rich C-terminus 849 936 IPR003889 GO:0005634
Mal7g4482 1040 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 1039 - -
Mal7g4482 1040 Pfam C5HC2 zinc finger 497 549 IPR004198 -
Mal7g4482 1040 MobiDBLite consensus disorder prediction 597 626 - -
Mal7g4482 1040 ProSiteProfiles JmjN domain profile. 33 74 IPR003349 -
Mal7g4482 1040 Pfam jmjN domain 34 67 IPR003349 -
Mal7g4482 1040 MobiDBLite consensus disorder prediction 105 122 - -
Mal7g4482 1040 Gene3D Cupin 18 391 - -
Mal7g4482 1040 MobiDBLite consensus disorder prediction 593 629 - -
Mal7g4482 1040 SMART fyrn_3 801 845 IPR003888 GO:0005634
Mal7g4482 1040 ProSiteProfiles FYR domain FYRN motif profile. 787 845 IPR003888 GO:0005634
Mal7g4482 1040 SMART JmjN_1 32 73 IPR003349 -
Mal7g4482 1040 SMART cupin_9 244 407 IPR003347 -
Mal7g4482 1040 SUPERFAMILY Clavaminate synthase-like 266 426 - -
Mal7g4482 1040 ProSiteProfiles JmjC domain profile. 244 407 IPR003347 -
Mal7g4482 1040 ProSiteProfiles FYR domain FYRC motif profile. 847 937 IPR003889 GO:0005634
Mal7g4482 1040 MobiDBLite consensus disorder prediction 123 145 - -
Mal7g4482 1040 Gene3D - 794 931 - -
Mal7g4482 1040 Pfam JmjC domain, hydroxylase 274 389 IPR003347 -
Mal7g4482 1040 MobiDBLite consensus disorder prediction 97 145 - -
Mal7g4482 1040 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 1 1039 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4482 Mal-Chr7 112775699 112780359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4482 789 975 JUMONJI Transcription Factor Family AT1G30810 49.733 9.69e-49 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal7g4482 JmjC 3.1e-45 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4482 - - gmx:100784581 1544.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4482 7 112775699 112780359 Mal7g4482 7 112775699 112780359 ECH