Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4479 ATGGTTTTGTTTTCTAATTCACTTCTTCATTTTGCCTTATTAATGATTCTTACCCCCTTTGATTACAACAACATTTTGTTTGGTGTATCATCAACCACTCTAAGCATTACCACAGATAAAGAAGCCTTAATCTCATTAAAGTCTCAATTAAGTAATAATGACACTAGTTCTCACCCATTATCCTCTTGGAGCCATATCTCATCTCCTTGCAATTGGACTGGTGTCCTATGTGACAAACATAACCAAAGAGTGACTGGCTTGGATCTTTCAAGCTTTGGACTCTCAGGTAACTTAAGCCCTTATATAGGTAATTTGTCCTCTCTTCAGTCCCTCAAATTGCAGGATAACCAGCTCACAGGAATCATTCCTAACCAAATCACCAATCTATACAATTTGAGAGTTCTAAATATGAGTTCCAACAGATTTGAAGGAATGATGTTTCCTTCAAATCTTACCACTTTAGATGAGCTTCAGATTCTTGATTTATCCTCAAACAAGATTGTAAGCAGAATTCCTGAAGACATAAGCAGCTTGAAAAAGTTGCAGGTGTTGAAACTTGGAAGGAATAGCTTCTATGGTACAATTCCACAATCTCTAGGAAATATTTCTTCTCTAAAAAATATTAGTTTTGGCACCAACTCTCTTGGTGGCTGGATTCCTAGTGAATTAGGTAGGTTACATAATTTAATTGAGCTTGATCTCACTCTTAACAATCTTAATGGAACTGTTCCACCTGTTATATATAATTTGTCTTCCCTTGTTAACTTGGCCTTAGCTTCAAATTCCTTTTGGGGTGAGATTCCTTATGATGTTGGTCATAAACTTCCAAACCTTCTAGTTTTCAATTTTTGTTTCAATAAATTCACAGGTAGAATTCCAGGGTCTTTGCATAACCTAACAAACATTAGGGTCATTCGTATGGCCTCTAACCACTTGGAAGGAACAGTTCCACCTGGTTTAGGAAATCTTCCATTTCTTCGCATGTATAATATTGGCTATAACAGGATAGTCACCTCAGGAGTCAATGGTTTGGACTTCATTACTTCATTGACAAACAGCACTCACTTGAACTTTCTAGCAATCGATGGAAACATGCTTGAAGGTGTGATTCCTGAAACCATTGGAAATCTCTCCAAGGAACTCTCCAAATTATACATGGGAGAGAGTCATTTCAATGGAAGTATACCGTCTTCCATAGGTCATCTTAGCGGTTTGCAGTTGTTAAACTTGAGCTACAATTCAATCAGTGGTGAGATTCCAAAGGAGTTAGGCCAATTAGAGGAGCTGCAAGAGCTATACCTGGATGGAAATAGGATAAATGGAGCTATTCCAATCTCTCTTGGTAATCTCATAAAGTTAAACAAGATTGATTTGTCAAAAAATGGACTTGTTGGTAGAATACCAAAAAGTTTTGGTAAATTTCAAAATCTGCTTTACATGGACTTATCTAGCAACAAACTCAATGGAAGCATACCTGTGGAAATCCTCAACCTACCAACTTTGAGCATTGTCTTAAACTTATCTATGAACTTGTTGAGTGGACCAATACCTCAAGTTGGGAAATTGACTACCATTGCCTCCATTGACTTTTCCAACAACCAATTGTATGGCAGCATTCCAAGCTCATTCAGCAGTTGTTTGAGCTTGGAGAAATTGTTTTTGGCAAGGAATATGCTTTCTGGTTCCATTCCAAAAGCTCTTGGAGATGTGAGAGCTTTGGAAACTTTGGACCTTTCCTCCAACCTACTCACAGGACCCATTCCTAATGAACTTCAAAATTTGCATGTCCTTCGGCTTTTAAATCTCTCTTACAATGATTTAGAAGGAGCCGTTCCTAGTGACGGAGTTTTCCAAAATCTCTCTAATGTCCACTTAGAAGGAAATAAAAAGCTATGTTTGCATTTTGCATGTGTGCATCAAGTCCATAGAAGACCACATGTCAGATTTTATATCATCATAGCTATTGTGGTAACATTGGTACTATGTCTCACCATTGGTTTGCTACTATACATGAAGTATACAAAGGTGAAGGTAACAGAAACGTCAGCATCTGAACAGCTAAAGCCACAGGCTCCAATGATCTCTTACGACGAGCTTCGCTTGGCAACTGAGGAATTCAACCAAGAAAGATTAATAGGAATTGGGAGTTTTGGATCAGTGTATATAGGTCATCTAAGTCAGGGAAATAGTACTGTTGCAGTGAAAGTACTTGACACTTTAAGAACAGGTTCTTTGAAGAGTTTCTTTGCAGAATGTGAGGCTATGAAGAATTCGAGGCATAGGAATCTGGTTAAGCTAATCACATCATGCTCTAGTGTTGACTTTAGAAACAATGATTTTCTGGCTTTGGTGTATGAGTATTTATGTAATGGGAGCTTGGAAGATTGGATTAAGGGGCAGAGAAAGCATGCAAATGGAAATGGTTTGAACCTTATGGAGAGACTGAATATAGCTACAGATGTTGCTTGTGCATTAGATTACTTGCACAATGATAGTGAAACTCCTATTGTGCACTGTGATCTGAAGCCAAGCAATATTCTCTTGGATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTGGCTAGGTTTCTGATTCAAAGATCAACTAATCAAGTTTCCATCAGCTCCACTCATGTCCTTAGAGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAGCAGCAGGGGATGTATATAGTTTTGGGATAGTGTTACTTGAACTTTTCTCTGGGAAAAGTCCCCAAGATGATTGCTTCACAGGAGGCCTGGGCATAACAAAATGGGTACAATCAGCATTCAAAAACAAGACGGTACAAGTCATTGACCCTCAGTTGCTATCCCTCATTTTGCATGATGATTCTGCTATAGACTCCAATCTACAACTTCGTTGTGTGGATGCAATTATGGGAGTTGGCCTGTCCTGCACTGCTGACAATCCAGATGAACGGATTGGCGTAAGAGTTGCGGTCCGCCAACTAAAAGCTGCTAGGGACTCTCTTCTGAAAAATTCTGATATTAAGAGTCCTGCTAGTCCTACTCATATTAAGAGTCATACTAAAAGCTATCTGATAAATAATGCAAGAGTTGAAATTTGA 3114 0.3863 MVLFSNSLLHFALLMILTPFDYNNILFGVSSTTLSITTDKEALISLKSQLSNNDTSSHPLSSWSHISSPCNWTGVLCDKHNQRVTGLDLSSFGLSGNLSPYIGNLSSLQSLKLQDNQLTGIIPNQITNLYNLRVLNMSSNRFEGMMFPSNLTTLDELQILDLSSNKIVSRIPEDISSLKKLQVLKLGRNSFYGTIPQSLGNISSLKNISFGTNSLGGWIPSELGRLHNLIELDLTLNNLNGTVPPVIYNLSSLVNLALASNSFWGEIPYDVGHKLPNLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMASNHLEGTVPPGLGNLPFLRMYNIGYNRIVTSGVNGLDFITSLTNSTHLNFLAIDGNMLEGVIPETIGNLSKELSKLYMGESHFNGSIPSSIGHLSGLQLLNLSYNSISGEIPKELGQLEELQELYLDGNRINGAIPISLGNLIKLNKIDLSKNGLVGRIPKSFGKFQNLLYMDLSSNKLNGSIPVEILNLPTLSIVLNLSMNLLSGPIPQVGKLTTIASIDFSNNQLYGSIPSSFSSCLSLEKLFLARNMLSGSIPKALGDVRALETLDLSSNLLTGPIPNELQNLHVLRLLNLSYNDLEGAVPSDGVFQNLSNVHLEGNKKLCLHFACVHQVHRRPHVRFYIIIAIVVTLVLCLTIGLLLYMKYTKVKVTETSASEQLKPQAPMISYDELRLATEEFNQERLIGIGSFGSVYIGHLSQGNSTVAVKVLDTLRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFRNNDFLALVYEYLCNGSLEDWIKGQRKHANGNGLNLMERLNIATDVACALDYLHNDSETPIVHCDLKPSNILLDEDMTAKVGDFGLARFLIQRSTNQVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELFSGKSPQDDCFTGGLGITKWVQSAFKNKTVQVIDPQLLSLILHDDSAIDSNLQLRCVDAIMGVGLSCTADNPDERIGVRVAVRQLKAARDSLLKNSDIKSPASPTHIKSHTKSYLINNARVEI* 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4479 1037 SUPERFAMILY L domain-like 38 336 - -
Mal7g4479 1037 SUPERFAMILY RNI-like 231 614 - -
Mal7g4479 1037 Pfam Protein kinase domain 706 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4479 1037 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Mal7g4479 1037 SMART serkin_6 706 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4479 1037 Pfam Leucine rich repeat 380 439 IPR001611 GO:0005515
Mal7g4479 1037 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Mal7g4479 1037 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1006 - -
Mal7g4479 1037 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Mal7g4479 1037 ProSiteProfiles Protein kinase domain profile. 706 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4479 1037 SUPERFAMILY Protein kinase-like (PK-like) 683 999 IPR011009 -
Mal7g4479 1037 Gene3D Ribonuclease Inhibitor 343 636 IPR032675 -
Mal7g4479 1037 SMART LRR_typ_2 105 128 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 154 178 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 226 250 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 402 425 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 299 323 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 129 149 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 594 619 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 426 450 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 570 593 IPR003591 -
Mal7g4479 1037 SMART LRR_typ_2 474 498 IPR003591 -
Mal7g4479 1037 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Mal7g4479 1037 Gene3D Phosphorylase Kinase; domain 1 692 787 - -
Mal7g4479 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Mal7g4479 1037 PANTHER OS04G0122200 PROTEIN 25 1006 - -
Mal7g4479 1037 Gene3D Ribonuclease Inhibitor 38 149 IPR032675 -
Mal7g4479 1037 Gene3D Transferase(Phosphotransferase) domain 1 788 1019 - -
Mal7g4479 1037 SMART LRR_sd22_2 105 131 - -
Mal7g4479 1037 SMART LRR_sd22_2 426 447 - -
Mal7g4479 1037 SMART LRR_sd22_2 226 252 - -
Mal7g4479 1037 SMART LRR_sd22_2 570 596 - -
Mal7g4479 1037 SMART LRR_sd22_2 154 177 - -
Mal7g4479 1037 Gene3D Ribonuclease Inhibitor 150 236 IPR032675 -
Mal7g4479 1037 Gene3D Ribonuclease Inhibitor 237 342 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4479 Mal-Chr7 112754980 112758711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4479 38 1010 Receptor kinase-like Gene Family AT3G47570 40.845 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal7g4479 Pkinase 4.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4479 - - gmx:100783512 1568.9