Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4473 ATGGATTCATCACCAGCCACTCCACTATGGCGCCAGGGACCAGAAGACAAGCCAGTGTTATGCAATGCATGTGGAACAAGATACCGAAACTGGGGAAACCTTGAACACCATTCTCTCCGGCGTTGTTTTCCAAAGGAACTTAACAATCTCAAAGGCAATTCTTCAACCATTAATGTTTCAGATTCAGATAATGATGAATCATCCCCAGAAGAGGTCTTATTGTTCGAAAATGTGAACAACTTCATACCTTCAGATGAAATTGGCCTTGGAGTTACTCTTCTTAAACCAGACGGTACTTCTAAGTAG 306 0.4216 MDSSPATPLWRQGPEDKPVLCNACGTRYRNWGNLEHHSLRRCFPKELNNLKGNSSTINVSDSDNDESSPEEVLLFENVNNFIPSDEIGLGVTLLKPDGTSK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4473 101 Gene3D - 3 66 IPR013088 GO:0006355|GO:0008270
Mal7g4473 101 PANTHER OSJNBB0038F03.10 PROTEIN 6 37 IPR044589 -
Mal7g4473 101 PANTHER OSJNBB0038F03.10 PROTEIN 43 101 IPR044589 -
Mal7g4473 101 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 53 - -
Mal7g4473 101 PANTHER GATA ZINC FINGER PROTEIN 6 37 - -
Mal7g4473 101 PANTHER GATA ZINC FINGER PROTEIN 43 101 - -
Mal7g4473 101 Pfam GATA zinc finger 7 30 IPR000679 GO:0006355|GO:0043565
Mal7g4473 101 CDD ZnF_GATA 7 32 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4473 Mal-Chr7 112668788 112669324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4473 6 38 C2C2-Gata Transcription Factor Family AT5G47140 60.606 1.07e-09 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal7g4473 GATA 4.9e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4473 - - mtr:MTR_8g089130 144.05