Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4442 ATGAATAGAAACTTTGTTTTTGTTTCAACAATTTTGGCTTGTATGATTCTGGTTAATGCCTTCAGCCACCAGAATGAGAAGAGCAACGATGGAGCCTCTCCGCACCTTGAGGTGGATTATGGGGGTTATCCAACTTGGTTTTCTGTTGCTAATCGTACACTCTTGTCCGTGTTAGAAAGTGGAGTTCAACCCAACGCAATAGTGGCTAAGGACGGTAGTGGTCAATTTAAGACTATTACCGATGCTATTAACTCATACCCCAAGAAAAATCAAGATAGATTCATCATCTATGTTAAGAGTGGTATCTACGACGAGTGTATCACCATTGACGCGAACAAGAGTTACATTCTCTTGTACGGCGATGGCCCTACAAAAACTATTATCACCGGGAACAAGAGTATCAATGAAGGAGTGAGCAAAACAATGAACACAGCCACCTTCACCACCCTTGCTAAAGATTTCATTGCTATGTCAATTACATTTGAAAACACCGCTGGTCATGAAGCTGGCCCAGCAGTGGCACTTCAAGTGGAAGGTGATCGTTCAGCATTCTTTGATTGTGGAATTCATGGTTACCAAGACACATTGTATGTGCACAAACGCCGCCAATTCTACCGCAACTGTGAGATCTCTGGAACAACCGATTTCATCTTTGGACATTCAACTACCTTAATCCAAAACTCCAAAATTATTGTGAGGAAGCCGGGTCCAAACCATAGCAACGTTGTGGTGGCAGATGGAACAAAACATAAGAATGCTCTCACTGGAATAGTCCTTCAAAATTGCTCGATCATGCCAGATGTTGAGCTTTTACCTGATAGGTTGACGGTGAAGACTTACTTGGCAAGGCCATGGAAGCCATTTTCAAGGGCAGTATTTATGAATAATGTTATGGGTGATTTGATTCAATCAGATGGATATTCTGTTTGGGATCCTAATGAACCAAACACGGCACATTGTTACTTTGCTGAGTTTGGTAACACTGGACCAGGTGCTAATGCTCAAGCTAGGGCTAAATGGAGTAAAGGTGTTATTAGTAAGCATGAGGCTGCTAAATTCACCGCTGAAAATTGGCTTCAAGCTAGCACTTGGTTGCCTGCCACTGGCATTCCTTTCAATCCTGGATTTGAGTCTTGA 1137 0.4248 MNRNFVFVSTILACMILVNAFSHQNEKSNDGASPHLEVDYGGYPTWFSVANRTLLSVLESGVQPNAIVAKDGSGQFKTITDAINSYPKKNQDRFIIYVKSGIYDECITIDANKSYILLYGDGPTKTIITGNKSINEGVSKTMNTATFTTLAKDFIAMSITFENTAGHEAGPAVALQVEGDRSAFFDCGIHGYQDTLYVHKRRQFYRNCEISGTTDFIFGHSTTLIQNSKIIVRKPGPNHSNVVVADGTKHKNALTGIVLQNCSIMPDVELLPDRLTVKTYLARPWKPFSRAVFMNNVMGDLIQSDGYSVWDPNEPNTAHCYFAEFGNTGPGANAQARAKWSKGVISKHEAAKFTAENWLQASTWLPATGIPFNPGFES* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4442 378 SUPERFAMILY Pectin lyase-like 62 374 IPR011050 -
Mal7g4442 378 Gene3D - 59 376 IPR012334 -
Mal7g4442 378 Pfam Pectinesterase 65 361 IPR000070 GO:0030599|GO:0042545
Mal7g4442 378 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
Mal7g4442 378 PANTHER PECTINESTERASE 17 376 - -
Mal7g4442 378 PANTHER PECTINESTERASE 17 376 - -
Mal7g4442 378 ProSitePatterns Pectinesterase signature 1. 90 109 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4442 Mal-Chr7 112085513 112087409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4442 30 376 Carbohydrate Esterase AT2G47030 44.199 9.62e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4442 K01051 - gmx:100808559 491.886