Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4425 ATGGCAATGAATAATAATCGGATGGACTTTGGGAGGCCTGTCTCAAGTAAAAGAAGATTGAAAGATTTATTGGTTCAAAAAGATAATCGCGTTTGTGCTGATTGTGGTGCTCCAGATCCTAAATGGGCGTCTGCCAATATTGGAGTTTTTGTATGCTTAAAATGTTGCGGTGTGCACAGAAGTCTTGGTACTCATATATCCAGGATTTTGTCTGTGACATTGGATGAATGGTCAATGGATGAAATAGATGCAATGATGGAAGTTGGAGGAAATGCTTCTGCTAATTCAATTTATGAGGCTTATATTCCAGAAGGATATACAAAACCTGGACCAGATGCCAGTAATGAGGAACGTGCAAAATTCATCAGGTCAAAGTATGAACGTCAAGAATTTTTGAAACATAGTTTGCGTATTCTATCAACAAAAAGCAGTCAAAAAAGTCGTCAATCAAGTTTCTCTAAAAGGATTATGGATAGCTTTCGAAAATCTAGTGGTTCAAAGAATATGGAAGGAATGGTAGAATTTATTGGAATGTTGAAAGTGAAAGTGGTTAAAGGCACAAATTTAGCAATTAGAGATATGATGACAAGTGATCCATATGTTGTTTTGAAGCTTGGCCAACAGACTGTTCAAACAACTGTAATAAAGAGTAATTTGAATCCAGTTTGGAACGAGGAACTTATGCTGTCCGTTCCTCAGCAATATGGACCAATAAGTTTGAAGGTATTTGATCATGACTTGTTCTCAGCTGATGATATAATGGGAGAAGCACAAATTGATCTTCAACCTCTCATAACATCTGCAATGGCATTTGGAGATACCGGAATGTTTGATGATATGCGAATAGGAAAATGGCTGAAATCTAATGACAATGCACTTATAGAGGATAGCATAGTCAATATCATTGATGGTAAGGTTAAACAAGAGATGTCAATTAAGCTCCAGAATGTCGAATGTGGAGAATTAAACTTAGAACTTGAGTGGATGTCTCTTGATCATTAG 1002 0.3663 MAMNNNRMDFGRPVSSKRRLKDLLVQKDNRVCADCGAPDPKWASANIGVFVCLKCCGVHRSLGTHISRILSVTLDEWSMDEIDAMMEVGGNASANSIYEAYIPEGYTKPGPDASNEERAKFIRSKYERQEFLKHSLRILSTKSSQKSRQSSFSKRIMDSFRKSSGSKNMEGMVEFIGMLKVKVVKGTNLAIRDMMTSDPYVVLKLGQQTVQTTVIKSNLNPVWNEELMLSVPQQYGPISLKVFDHDLFSADDIMGEAQIDLQPLITSAMAFGDTGMFDDMRIGKWLKSNDNALIEDSIVNIIDGKVKQEMSIKLQNVECGELNLELEWMSLDH* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4425 333 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 10 333 IPR044518 GO:0005096|GO:0005543
Mal7g4425 333 Pfam C2 domain 178 267 IPR000008 -
Mal7g4425 333 CDD ArfGap 20 126 - -
Mal7g4425 333 ProSiteProfiles C2 domain profile. 159 274 IPR000008 -
Mal7g4425 333 Gene3D C2 domain 175 333 IPR035892 -
Mal7g4425 333 SMART C2_3c 178 273 IPR000008 -
Mal7g4425 333 Gene3D Arf GTPase activating protein 5 138 IPR038508 -
Mal7g4425 333 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Mal7g4425 333 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Mal7g4425 333 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Mal7g4425 333 CDD C2_ArfGAP 176 320 - -
Mal7g4425 333 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 10 333 - -
Mal7g4425 333 SUPERFAMILY ArfGap/RecO-like zinc finger 17 133 IPR037278 -
Mal7g4425 333 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 145 IPR001164 GO:0005096
Mal7g4425 333 SMART arf_gap_3 18 139 IPR001164 GO:0005096
Mal7g4425 333 Pfam Putative GTPase activating protein for Arf 18 133 IPR001164 GO:0005096
Mal7g4425 333 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 173 271 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4425 Mal-Chr7 111783292 111787389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4425 3 333 C2H2 Transcription Factor Family AT4G21160 71.810 0.0 515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4425 7 111783292 111787389 Mal7g4425 7 111783292 111787389 ECH