Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4385 ATGGATGACAATTCAGCTAGCAGTGGAATCAATGAGGTTGTTTTAAACGTAAAAAAGGATGTCTCTAACATAACTGAAGACTCAAGCTCTCATGCCACTGCTTCTTTCTTGCAGAAGATGGTAGCTGAGGTGGTAGGGACATATTTCTTGATATTTGCTGGTTGTGCTTCTGTGGTGGTGAATAAGAACAATGAAAATGTAGTAACACTTCCTGGAATTTCAATTGTTTGGGGACTTGCTGTGATGGTGCTGGTTTACTCTCTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCAGTTACTATTGCTTTTGCCAGCACAAGAAGATTTCCCTTGAAACAGGTACCAGCTTATGTAGCAGCTCAAGTCTTTGGATCCACACTTGCAAGTGGAACTCTTAGACTAATATTTAGCGGCAAACATAATCAGTTTGCAGGAACACTTCCAGCTGGGTCTAACCTTCAAGCTTTTGTGATTGAATTCATCATCACTTTTTACCTTATGTTTATCATATCTGGAGTTGCCACCGATAATAGAGCGATTGGTGAGTTGGCTGGGATTGCCGTTGGATCTACTGTACTTTTGAATGTGATGTTTGCAGGGCCAATCACAGGAGCATCAATGAATCCAGCAAGAAGTATAGGACCTGCTTTTCTACACAGTGAATACAGAGGAATATGGATATACTTGGTGTCTCCTATTCTTGGAGCTGTAGCTGGTGCATGGGTTTATAACGTCATTCGGTACACGGATAAGCCAGTTCGTGAGATCACCAAGAGCTCATCTTTCCTAAAAGCAGCAAAACCATAG 810 0.4185 MDDNSASSGINEVVLNVKKDVSNITEDSSSHATASFLQKMVAEVVGTYFLIFAGCASVVVNKNNENVVTLPGISIVWGLAVMVLVYSLGHISGAHFNPAVTIAFASTRRFPLKQVPAYVAAQVFGSTLASGTLRLIFSGKHNQFAGTLPAGSNLQAFVIEFIITFYLMFIISGVATDNRAIGELAGIAVGSTVLLNVMFAGPITGASMNPARSIGPAFLHSEYRGIWIYLVSPILGAVAGAWVYNVIRYTDKPVREITKSSSFLKAAKP* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4385 269 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Mal7g4385 269 PANTHER AQUAPORIN NIP2-1 1 267 IPR034294 -
Mal7g4385 269 SUPERFAMILY Aquaporin-like 34 258 IPR023271 -
Mal7g4385 269 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 267 - -
Mal7g4385 269 Pfam Major intrinsic protein 33 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 Gene3D Glycerol uptake facilitator protein. 2 260 IPR023271 -
Mal7g4385 269 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal7g4385 269 TIGRFAM MIP: MIP family channel proteins 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4385 Mal-Chr7 111348994 111351299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4385 2 269 Major Intrinsic Protein MIP AT5G37810 55.185 9.25e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4385 K09874 - gmx:100794883 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4385 7 111348994 111351299 Mal4g4442 4 122498211 122500045 PCT