Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4379 ATGGATGAAGCAGGAAGTTCAAGTTCCTTGCCACCTTTTCTGGCAAAGACTTATGAGATGGTCGATGATTCTTCCTCGGATCGTATCGTTTCTTGGAGTTTGACTAACAAAAGTTTCATTGTATGGGATCCACCGGAATTCGCAAGGGTTTTGCTCCCTAGATTCTTTAAGCACAATAACTTCTCCAGTTTTATCAGGCAGCTGAATACATATGGATTTAGGAAAGTTGATCCGGAACAATGGGAATTTGCCAATGATGATTTTATAAGGGGGCAGCCGCATCTTATGAAGAACATTCATAGACGTAAGCCTGTTCACAGCCATTCTCTGAATAATCTTCAAGCACAAACGCCTCTAACGGAGTCTGAAAGGCAAAGTTTGACTGATGAAATAGAGAAGCTGAAACATGATCGAGAACAACTTCATATGGAGATAAAGAGATACCAACATGAGTGGGAAACATATGAGATTCAAATGCATTGCTCGAAAGATAGGTTGGAAAAATTGGAACAAAAGCAGCAAAAGATGTTGTCGTCTGTTTCTCAAGTATTGCAGAAACCTGTGATTGCTGTAAATCTCTTACCGTTGACAGAAACCATGGAGAGAAAACGAAGGTTGCCTGCGAAAAGTGGCTGCTTTAATAATGAAGCTGGCGTTGAAGATATGGAAACTTCTGTAGCCTTGCCCAGAGAAAATGCAGAGGGTAACTCTATTTTGACATTAAACACAGAGAGATTGGATCAGCTTGAGGCATCGGTGGCATTTTGGGAGACTGTTGCGTATGAAGTTGGTGACAACTTCGTTCACACTCATTCAAACATTGATTTAGACGAATCTACATGCTGTGCTGATAGTTTGTCCATATCTTGTCAGCAACTAGATGTTGAAGTTCGAGCTAAGTCACCTGAAATTGACATGAACGTTGAACCAGCTGCTGCTGCTCTCGAGACTGTTGCAGTAAAAGAACAACCTGCGAGAATCACCACTGCAGCAACTGGGGTTAATGATGTATTCTGGGAACAGTTCTTAACAGAGGATCCTGGTGCATCGGAAGCGCAGGAAGTGCAATCAGAAAGAAAAGATAGTAGCAGCAGAAAAAATGAAGGAAAACCTAGTGATCATAGTAAATTTTGGTGGAATATGCGGAAAACAAATAATCTTCCAGAACAGATGGGGCATGTTAGTCAAGTAGAGAAAATTTAG 1203 0.4115 MDEAGSSSSLPPFLAKTYEMVDDSSSDRIVSWSLTNKSFIVWDPPEFARVLLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFIRGQPHLMKNIHRRKPVHSHSLNNLQAQTPLTESERQSLTDEIEKLKHDREQLHMEIKRYQHEWETYEIQMHCSKDRLEKLEQKQQKMLSSVSQVLQKPVIAVNLLPLTETMERKRRLPAKSGCFNNEAGVEDMETSVALPRENAEGNSILTLNTERLDQLEASVAFWETVAYEVGDNFVHTHSNIDLDESTCCADSLSISCQQLDVEVRAKSPEIDMNVEPAAAALETVAVKEQPARITTAATGVNDVFWEQFLTEDPGASEAQEVQSERKDSSSRKNEGKPSDHSKFWWNMRKTNNLPEQMGHVSQVEKI* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4379 400 MobiDBLite consensus disorder prediction 348 400 - -
Mal7g4379 400 MobiDBLite consensus disorder prediction 352 377 - -
Mal7g4379 400 Coils Coil 166 186 - -
Mal7g4379 400 SMART hsfneu3 9 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g4379 400 Gene3D - 5 103 IPR036388 -
Mal7g4379 400 SUPERFAMILY "Winged helix" DNA-binding domain 8 102 IPR036390 -
Mal7g4379 400 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-4C 2 381 - -
Mal7g4379 400 MobiDBLite consensus disorder prediction 378 392 - -
Mal7g4379 400 Pfam HSF-type DNA-binding 13 102 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g4379 400 ProSitePatterns HSF-type DNA-binding domain signature. 52 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g4379 400 Coils Coil 124 151 - -
Mal7g4379 400 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 2 381 IPR027725 -
Mal7g4379 400 PRINTS Heat shock factor (HSF) domain signature 51 63 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g4379 400 PRINTS Heat shock factor (HSF) domain signature 13 36 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal7g4379 400 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4379 Mal-Chr7 111260826 111262127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4379 1 399 HSF AT4G18880 51.463 1.32e-122 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal7g4379 HSF_DNA-bind 1.2e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4379 K09419 - gmx:100798004 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4379 7 111260826 111262127 Mal4g4451 4 122615141 122617121 PCT