Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4378 ATGAAGTGGGGTGGAAGAAAACCTTCTTCAGCTTCACCTTCTTCTAAATCTTCATTCATCTCTCATGTATCTCCTTTTTCATGGCTCTCAAAGTTCAAGCAAATGAAAATGAACTCAGACTCGGAGCTAAAACCTGAAAAGCAGAAACAGAACTCCCCATCTGATAACGGTTCATCACAATTTGCTTCTGGGAGTAGAGGCAGGTTTTATGGAGGTAATGGTGATGATGATGCTTTCTGGAGATTGTCATTTGGTGACGAGGTTACTAATGACCAAAGGAAGAAAAGTAAAGACATTCTGAAGCCGGTAATGTACAATTTGGATACGAAAAGACATGGAAGAAAGCAGAGGGATATTGAAAACAGAGAAGACAGAAAATTGCTGAATCAAACAAAGAGTGCAAAGGAACTTGAATGTTTGAAGAGAAGATATGAGAGGAAAGCACAAAGAGTTTTACAAGAGCAGCTCTTGAAATTACAGAATGCAGCAGAGGAAGACCAATGTACATCAAGTAAATGTAAATCCTCAGAAAAGGATGAGCTTCAATTTGAATCACCAACAACTCATTTATTTTCCTCTAATGTAGAAGCAGAAAGTTCTGTTCTTGGCCTTGAAAGTATCAGAGAAAATGGTGTTTCTAGTTCTCAGAACTTGGAGAAATGGCAGAATGTGAAACAAAGTGAGGAGTTTAAAGTAAAGGTTAACAAAAAGAGGGAATCAGTTCATGTGAGCAGAGAATTGCAGAGGAGGAAACCAAAGTACAGTCCCAAGGTAAGAGTGCATTCTCCAAAGATGGCTACTAAGGTTGAAATACGCAAAATAAAGGCGATAGAAGACAAAAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAGGAAATTGTGGAGGAAACAGAAGAAGGGTTGGATAGCTTTGCTGTTGTGAAGTGTTCTTTGGATCCACAACAAGATTTTAGAGATTCAATGATCGAGATGATCAAAGAGAAACAGATAAGCCAGCCAGAAGAAATGGAAGAGTTATTAGCATGTTATTTGAGTTTGAATTCCAATGAATATCATGATTTAATTATCAAAGTGTTCAGGCATGTATGGTTATGTATGAGCCAATCTGGTTTGTGTAATAAATCAGACAAGCAATTACTATGA 1143 0.3736 MKWGGRKPSSASPSSKSSFISHVSPFSWLSKFKQMKMNSDSELKPEKQKQNSPSDNGSSQFASGSRGRFYGGNGDDDAFWRLSFGDEVTNDQRKKSKDILKPVMYNLDTKRHGRKQRDIENREDRKLLNQTKSAKELECLKRRYERKAQRVLQEQLLKLQNAAEEDQCTSSKCKSSEKDELQFESPTTHLFSSNVEAESSVLGLESIRENGVSSSQNLEKWQNVKQSEEFKVKVNKKRESVHVSRELQRRKPKYSPKVRVHSPKMATKVEIRKIKAIEDKKKAKLKMKKEEEIVEETEEGLDSFAVVKCSLDPQQDFRDSMIEMIKEKQISQPEEMEELLACYLSLNSNEYHDLIIKVFRHVWLCMSQSGLCNKSDKQLL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4378 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 370 IPR038933 GO:0045892
Mal7g4378 380 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 305 366 IPR006458 -
Mal7g4378 380 Coils Coil 280 300 - -
Mal7g4378 380 MobiDBLite consensus disorder prediction 50 66 - -
Mal7g4378 380 MobiDBLite consensus disorder prediction 1 20 - -
Mal7g4378 380 Coils Coil 127 165 - -
Mal7g4378 380 PANTHER TRANSCRIPTION REPRESSOR OFP4 11 370 - -
Mal7g4378 380 ProSiteProfiles OVATE domain profile. 306 365 IPR006458 -
Mal7g4378 380 Pfam Transcriptional repressor, ovate 310 366 IPR006458 -
Mal7g4378 380 MobiDBLite consensus disorder prediction 241 261 - -
Mal7g4378 380 MobiDBLite consensus disorder prediction 37 70 - -
Mal7g4378 380 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4378 Mal-Chr7 111257017 111258159 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mal7g4378 Ovate 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4378 - - mtr:MTR_8g087530 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4378 7 111257017 111258159 Mal4g4453 4 122629270 122630301 PCT