Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4349 ATGGATCAGGGAACAAGTAAAGGTAGTGGTGAAATGTTGGATCAAGTTGATAAAGAGGTTGATGAGAATTCGAGTCATTTGGTTGAAGGAGTTGCAGCTGATGCAGGAGCTGGGCATAGCTTGGGTGATAGGGTTAGTGTATGCGGTGAAGATCGGAATTCAGAAGATATGTGCAATGATCTTGTATTGAATGAGGAGGTAAAGGAAAAAGCTTTAGAAGTTAGGGGGCAGAATATTGGTGGTGATCCTGAAAACATCGATGATGAATTGCACGGGGTTGGTCAAGGGACTAGTTATAATTCAAGTAATTCGGTTAATCAGGAAACACTGGAGACCTGTGTTGTAATAGATTCTTCTGCTCAAGTTGAGCGTGTCACTGTCAATGGAGATGATAGAAAATTGGAAGCTAAAACCAATGAGTTGGGGTTGAACAAGTTATCGATTAAAGCACCGAAAGGGGTGTCTGAGACTGATAAAAATTCATGTGTGATTGATATGAACTGTGGCAGCTGCAGAGATTTTAGTGATAATTTAGATGGTGAAATAGTTTGTAGGATTTGCCATCTGGCTTCTGGGCAACCGATAGAAGCAACTGCTGTTGGCACTCCAAATAGTGCTAAGGATAATACAGGTTTGATTATGCTTGGTTGTGCATGTAAAGATGAGCTTGGCATTGCACACAGTCATTGTGCTGAGGCATGGTTCAAGATTAAAGGAAACAGGTTGTGCGAAATATGTGGTGAGACTGCCAAAAACGTGTCAGAGGTTACTGGTAATGCATTTATGGAAGAATGGTGTGAAAGTGGATTCATCGACAATGGTAGTACCTCACCCCGCAGGTTGGTTGGATGCTGGCGCGGGCAGCCATTCTGTAACTTCTTGATGGTGTGTCTGGTAATAGCTTTTGTTCTGCCATGGTTCTTTCGTGTAAAGATGTTCTAG 942 0.4236 MDQGTSKGSGEMLDQVDKEVDENSSHLVEGVAADAGAGHSLGDRVSVCGEDRNSEDMCNDLVLNEEVKEKALEVRGQNIGGDPENIDDELHGVGQGTSYNSSNSVNQETLETCVVIDSSAQVERVTVNGDDRKLEAKTNELGLNKLSIKAPKGVSETDKNSCVIDMNCGSCRDFSDNLDGEIVCRICHLASGQPIEATAVGTPNSAKDNTGLIMLGCACKDELGIAHSHCAEAWFKIKGNRLCEICGETAKNVSEVTGNAFMEEWCESGFIDNGSTSPRRLVGCWRGQPFCNFLMVCLVIAFVLPWFFRVKMF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4349 313 MobiDBLite consensus disorder prediction 1 24 - -
Mal7g4349 313 Pfam RING-variant domain 205 246 IPR011016 GO:0008270
Mal7g4349 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 251 IPR013083 -
Mal7g4349 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 313 - -
Mal7g4349 313 ProSiteProfiles Zinc finger RING-CH-type profile. 176 253 IPR011016 GO:0008270
Mal7g4349 313 PANTHER ZINC FINGER, RING-CH-TYPE 1 313 - -
Mal7g4349 313 SMART ringv_2 183 247 IPR011016 GO:0008270
Mal7g4349 313 SUPERFAMILY RING/U-box 181 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4349 Mal-Chr7 110757698 110759496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4349 164 312 C3H Transcription Factor Family AT5G05830 37.888 3.55e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4349 - - gmx:100791129 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4349 7 110757698 110759496 Mal4g4483 4 123092120 123094136 PCT