Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4347 ATGAAACCCTTTTACAGATTCTTGATTCTCCTAACCTTCTTCTCTTTAGTAGAATCTTCATGCAACAATGAAGACCAAGCCTTAATTTCAAAAGCTTTCAAATCTGTTTATGGCTTCAACTCTTCCACCTTATTCCAAACAAGAGATCCAAACTGTTCAAACTCTCATATCACCAAAATAACTCTTCCCTCCAAAAACCTAAGCGGAACAATTTCATGGGGTTATCTCAAAAACATATCAAAGTTGCAAATTCTTGATCTCTCTGGAAATTCTCTACAAGGCCACGTACCAAGCTGGTTTTGGTCTAGCTTTTCATCCTTGTTAGAAATAAACCTCTCAAGAAACAAATTTGGAGGAAGCATCACCATTGAGTTGAATAACACATCAACCATTCAAAACCTCAATCTCTCACACAACAGGTTCAGTAACATAGTTCAACTTTCTAGCTTCCAAAACCTTAAAATCCTCGACCTTTCACACAACAAGCTAAGAACACTTCCCATAGGTTTTCAAAACCTTACCAAACTACAACACCTTGACCTTTCAAGTTGCAATATCAAAGACAACATAAAAGTAAAACCCATTTCTTCCTTACACAATCTTCACTACTTAGACTTATCAAACAACACTTTAACCGGTTCTTTTCCTTCAGATTTTCCACCACTTAACAATCTCAAATTCTTCAACATTTCACACAACAACTTCACCTATCACAACACTCCAAAACAAAACATCATTCATAGGAAACAAACCAAACCAAACTCCAAAAGATTGATACTTATAGTGTGTTCTACATTATCAACACTTGTTCTAGCTATAATTTTCATTTGGGTAATCTTCATTATTCACAAAAAGATGAAACAACGTTCAAAGATGAAAAAATGGGCAATTTCATTACCGGTTATGATGAACACAACAAACACAAAGGTGGAGAAAACAGGACCATTTGAGTTTGAAACAGATTCAGGAACCAAATGGGTTGCAGATGTGAAGGAACCAACATCAGCACCAGTGGTGATGTTTGAGAAGCCATTGATGAACTTCACATTCAAAGATCTCATCATTGCCACGTCACATTTCGGGAAAGAGTCGCAGCTAGCTGAAGGAAGGTGTGGGCCAGTGTATTGGGCAGTGTTACCCGGTGAACTCCACGTGGCAATCAAGGTTCTTGAACATGCTAGAGACGTTGATTATGATGACTCTGTTGCTATGTTCGTTGACTTATCGAAACTGAAGCATCCAAATTTGTTGCCTCTTTCTGGTTACTGTATTGCAGGTAAGGAGAAGCTAGTGCTATACGAGTTTATGGAAAACGGCGACTTAGGTCGATGGTTACACGAGCTTCCAACGGGGGATACAAATGTGGAGGATTGGGCTGACGATGCGTGGGAGTTGCAAAACGGCGCTGTCGAAGCATCTCAAGAAAAGATGGGTTGGTTGGCACACCACCGTATCGCAGTGGGGATAGCGCGTGGCCTCGCATATCTTCACCACGCAGCGTTGAGGATGATGTGTATTGTTTTGGAGTGGTGTTGGTGGAGTTGCTTACCGGGAGGATTGGTACAACAGAAACAATTGTTGCAGTTCGAAAGGCGGTGA 1599 0.4034 MKPFYRFLILLTFFSLVESSCNNEDQALISKAFKSVYGFNSSTLFQTRDPNCSNSHITKITLPSKNLSGTISWGYLKNISKLQILDLSGNSLQGHVPSWFWSSFSSLLEINLSRNKFGGSITIELNNTSTIQNLNLSHNRFSNIVQLSSFQNLKILDLSHNKLRTLPIGFQNLTKLQHLDLSSCNIKDNIKVKPISSLHNLHYLDLSNNTLTGSFPSDFPPLNNLKFFNISHNNFTYHNTPKQNIIHRKQTKPNSKRLILIVCSTLSTLVLAIIFIWVIFIIHKKMKQRSKMKKWAISLPVMMNTTNTKVEKTGPFEFETDSGTKWVADVKEPTSAPVVMFEKPLMNFTFKDLIIATSHFGKESQLAEGRCGPVYWAVLPGELHVAIKVLEHARDVDYDDSVAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMENGDLGRWLHELPTGDTNVEDWADDAWELQNGAVEASQEKMGWLAHHRIAVGIARGLAYLHHAALRMMCIVLEWCWWSCLPGGLVQQKQLLQFERR* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4347 532 ProSiteProfiles Leucine-rich repeat profile. 130 151 IPR001611 GO:0005515
Mal7g4347 532 PANTHER KINASE, PUTATIVE-RELATED 3 237 - -
Mal7g4347 532 PANTHER KINASE, PUTATIVE-RELATED 239 503 - -
Mal7g4347 532 Pfam Protein tyrosine and serine/threonine kinase 363 499 IPR001245 GO:0004672|GO:0006468
Mal7g4347 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 237 - -
Mal7g4347 532 SUPERFAMILY L domain-like 50 263 - -
Mal7g4347 532 Gene3D Ribonuclease Inhibitor 127 251 IPR032675 -
Mal7g4347 532 ProSiteProfiles Protein kinase domain profile. 360 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal7g4347 532 Gene3D Ribonuclease Inhibitor 19 126 IPR032675 -
Mal7g4347 532 SUPERFAMILY Protein kinase-like (PK-like) 337 498 IPR011009 -
Mal7g4347 532 Pfam Leucine Rich Repeat 200 219 IPR001611 GO:0005515
Mal7g4347 532 Pfam Leucine Rich Repeat 81 100 IPR001611 GO:0005515
Mal7g4347 532 ProSiteProfiles Leucine-rich repeat profile. 152 174 IPR001611 GO:0005515
Mal7g4347 532 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 239 503 - -
Mal7g4347 532 SMART LRR_typ_2 198 221 IPR003591 -
Mal7g4347 532 SMART LRR_typ_2 79 102 IPR003591 -
Mal7g4347 532 SMART LRR_typ_2 150 172 IPR003591 -
Mal7g4347 532 Pfam Leucine rich repeat 130 186 IPR001611 GO:0005515
Mal7g4347 532 Gene3D Phosphorylase Kinase; domain 1 320 435 - -
Mal7g4347 532 PRINTS Leucine-rich repeat signature 153 166 - -
Mal7g4347 532 PRINTS Leucine-rich repeat signature 198 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4347 Mal-Chr7 110721278 110723730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4347 55 499 Receptor kinase-like Gene Family AT5G07280 30.435 2.05e-49 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Mal7g4347 PK_Tyr_Ser-Thr 1.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4347 - - lja:Lj0g3v0310539.1 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4347 7 110721278 110723730 Mal4g4493 4 123272086 123275353 PCT