Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4343 ATGAATATGTCAGATGGATATGAGAAACATGAGAATGAGAGAAGTGGGAAGAGTGAAGAACATGCTGAGGATACTTCAATGGGATCATCTTCACATAAGTGTTCAATATCATTTGATTTGAATGAAGAAGCTAGTAGTGATCAAGATGTTAACAATGATGAGGCATGTGATGAATTATTAGTCAATGACGATGATGATGAGAAATTAGCAAAAGATGATGATGAAGGTAGTTCAAGTTCAACAAAAAGAAGTAGTGGATCAAATGAAAGAAGAAGAAATGGTGTAAGACAATATGTTAGATCAAAGATGCCTAGGCTTAGGTGGACTCCTGATCTTCATCATTCCTTTATGCATGCTGTTGAAAGGCTTGGAGGCCAAGAGAGAGCAACACCAAAGTTGGTGCTTCAACTAATGAATGTGAGAGGACTAAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTACCGGAGCAAGAAACTTGACGAGGCTGGACAAGTACTAAGTCCAACACACAGATCAACTCATGAACTAGGTTCCATTTCTCATCATGTAGCCCATCAATCCATGATGCCGCATCAACATTTCAAGATGGCAAATGGTGGAATTGTTCTAGAAACAAATTACAACCACCACAGTTATAGTTTCCACAATCTCCTGCATCCCTCATCCTTGTCACATTCACATTCAAAGGCCATCAATTCAAGGCACCAAGAATGGTACTTAAATCATCAATCTTTGAGACCAAGCTACATGAGCAATGAATTAGTTATGCCATCAACAGCCTTTCATACGCAAGGAAGATCATCCATAACTTTGAACCAGCAGCTTCAAGTTAAGGATACTACGGCCACCACGACGCTTGCTCCTATGAGACCAAGCCAATTTCTTGAAGAAAAAAGATGGCCTCCCTTAGAAATCATGAACAATCATCCATATTGGAAGAAAAATTTACATGATAATTTTTCTACTAATACTAGTGAGACACAATTTGGCTCCACTACAACATCACTTAGACCAGCTGAGGTGAGCTTTGGAAACAATACAAGAAACAGGGAACATATATCAAACATCAAAGACCACAACTATTTCAATAGTTCAAAGGTTGAATTTGATCCCCCGTTTCGGATTAAGTTGAATCAAGAGACATTGCTGAAAGACAAAAAATGGGTGCCTGATTTGCAACTGAGTTTAAGTCAAACAAATGGTGACAATGATGGCAAGAGTGATGGTTTGAGAGAAACCAAAGAAATCGACACGAAACTCTCACTATCTTAG 1275 0.3882 MNMSDGYEKHENERSGKSEEHAEDTSMGSSSHKCSISFDLNEEASSDQDVNNDEACDELLVNDDDDEKLAKDDDEGSSSSTKRSSGSNERRRNGVRQYVRSKMPRLRWTPDLHHSFMHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSPTHRSTHELGSISHHVAHQSMMPHQHFKMANGGIVLETNYNHHSYSFHNLLHPSSLSHSHSKAINSRHQEWYLNHQSLRPSYMSNELVMPSTAFHTQGRSSITLNQQLQVKDTTATTTLAPMRPSQFLEEKRWPPLEIMNNHPYWKKNLHDNFSTNTSETQFGSTTTSLRPAEVSFGNNTRNREHISNIKDHNYFNSSKVEFDPPFRIKLNQETLLKDKKWVPDLQLSLSQTNGDNDGKSDGLRETKEIDTKLSLS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4343 424 MobiDBLite consensus disorder prediction 324 349 - -
Mal7g4343 424 Pfam Myb-like DNA-binding domain 106 156 IPR001005 -
Mal7g4343 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 160 IPR017930 -
Mal7g4343 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 104 159 IPR006447 GO:0003677
Mal7g4343 424 MobiDBLite consensus disorder prediction 72 96 - -
Mal7g4343 424 SUPERFAMILY Homeodomain-like 102 158 IPR009057 -
Mal7g4343 424 MobiDBLite consensus disorder prediction 46 71 - -
Mal7g4343 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 424 IPR044848 GO:0003700
Mal7g4343 424 MobiDBLite consensus disorder prediction 396 424 - -
Mal7g4343 424 MobiDBLite consensus disorder prediction 28 45 - -
Mal7g4343 424 MobiDBLite consensus disorder prediction 406 424 - -
Mal7g4343 424 MobiDBLite consensus disorder prediction 1 27 - -
Mal7g4343 424 Gene3D - 103 160 - -
Mal7g4343 424 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 424 - -
Mal7g4343 424 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4343 Mal-Chr7 110632069 110635166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4343 93 163 G2-like Transcription Factor Family AT2G42660 77.465 2.20e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal7g4343 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4343 - - mtr:MTR_8g086410 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g4343 7 110632069 110635166 Mal4g4499 4 123349509 123353511 PCT