Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g4334 ATGAATATGGAAAACCAAAGAAAGAAAAACACAGGGCGCAAGAAGATTGAGATCAAGAAGCTTGAAAAAGAAACCAACAAACAAGTCACTTTCTCAAAAAGAAGACAAGGTTTATTCAGAAAAGCAAGTGAACTTTGTGTTTTATGTGATGTTCATGCAGCCATCATTGTGTTTTCCCCTGCTGACAAACTATTTTGCTTTGGTAAACCAAACACCGACGCGATCCTCAAAAGCTACATCAATGGAACCACCGAGTTTGAGGATTCAAAGTCAACAGGAAATTCTTCAACAAATGAAGAGAGCAATAAAGAATATGAGGAGGCACTAAAGATGTTGGAGTTGGAAAAGAAGAAACTTGCAGAGGCTGAAAATTTGGCTAAGGTTTGGAAAAATGTTAGTTGGTGGAATGATTCAATTGATGATATGAATATTGATGAGCTTGAAGGATTTATGGAGTCCCTTTATGAGTTAAAGAGGAAGCTACTTGAAAGGGCTGAAGAACAGGCAAATAGGATGATGTTTGCCATGTTGTAG 534 0.3745 MNMENQRKKNTGRKKIEIKKLEKETNKQVTFSKRRQGLFRKASELCVLCDVHAAIIVFSPADKLFCFGKPNTDAILKSYINGTTEFEDSKSTGNSSTNEESNKEYEEALKMLELEKKKLAEAENLAKVWKNVSWWNDSIDDMNIDELEGFMESLYELKRKLLERAEEQANRMMFAML* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g4334 177 Gene3D - 23 118 IPR036879 GO:0003677|GO:0046983
Mal7g4334 177 ProSiteProfiles MADS-box domain profile. 11 71 IPR002100 GO:0003677|GO:0046983
Mal7g4334 177 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL62 8 176 - -
Mal7g4334 177 SMART madsneu2 11 70 IPR002100 GO:0003677|GO:0046983
Mal7g4334 177 SUPERFAMILY SRF-like 12 82 IPR036879 GO:0003677|GO:0046983
Mal7g4334 177 Coils Coil 151 171 - -
Mal7g4334 177 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 21 67 IPR002100 GO:0003677|GO:0046983
Mal7g4334 177 PANTHER MADS BOX PROTEIN 8 176 - -
Mal7g4334 177 Coils Coil 95 132 - -
Mal7g4334 177 PRINTS MADS domain signature 13 33 IPR002100 GO:0003677|GO:0046983
Mal7g4334 177 PRINTS MADS domain signature 48 69 IPR002100 GO:0003677|GO:0046983
Mal7g4334 177 PRINTS MADS domain signature 33 48 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g4334 Mal-Chr7 110478997 110479530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal7g4334 8 176 Type I MADS-box Gene Family AT5G60440 39.888 4.31e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mal7g4334 SRF-TF 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g4334 - - cam:101502875 200.29